| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0018 |
|---|
| Symbol | |
|---|
| ID | 6287739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 30115 |
|---|
| End bp | 30849 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642623591 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001897615 |
|---|
| Protein GI | 187927128 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATC AATTCGACTT TGGTGCTGTC TTCAGTTACA GCGGCCAGCT CGCGCAGGGC
GCGGCATTCA CGCTCGCGCT CACGGCGGCG GGCGCGGTGG CGGGTGGCGC CATCGGCATT
GCCGGGGGCG TGTGCCGCGC CTGGCGCATC GCCCCCTTCA ATGCGCTGTT CAAGGTGTAT
GTGGAGGGCA TCCGCAACAC GCCGTTCCTT GTGCAGTTGA TGTTCGTGTT CTTTGGCTTG
CCCTCGCTGG GTGTGCAGAT CAACGAATGG CAGGCGGCAT TGCTCACGGC GGTGGTCAAC
CTGGGCGCGT ACATCACCGA GATCGTGCGT GCAGGCATTC AAGAAACGCC GCGCGGCCAA
TTGGAAGCGG CCAATGCCTT GGCGATGAGC CGCTGGGCCG TCTTCCGGCA CGTGGTGCTG
CGGCCCGCGC TGCAGAAGGT GTGGCCGGCG CTCAGCAGCC AGATCGTGAT CGTGATGCTG
GGCACGTCGG TCGTCTCGCA GATTGCCGCG CAGGATCTGA CCTTTGCAGC CAACTTCATC
CAGTCGCGCA ACTTCCGCGC GTTTGAAACC TACCTGGTGG TGACGGCGCT GTACTTTGCG
CTGGCGCTGT TGCTGCGTCA GTTGCTGGCC TGGATCGGGC AGCGCTTTGT CGTGGGGCGC
CGCGCGCCTG CGGCGTCCGC TGCTCCGCTT GCTGCCACCG CCACCGCAGC CGCCTCCGTT
GGAGACGCCG CATGA
|
|---|
| Protein sequence | MAYQFDFGAV FSYSGQLAQG AAFTLALTAA GAVAGGAIGI AGGVCRAWRI APFNALFKVY
VEGIRNTPFL VQLMFVFFGL PSLGVQINEW QAALLTAVVN LGAYITEIVR AGIQETPRGQ
LEAANALAMS RWAVFRHVVL RPALQKVWPA LSSQIVIVML GTSVVSQIAA QDLTFAANFI
QSRNFRAFET YLVVTALYFA LALLLRQLLA WIGQRFVVGR RAPAASAAPL AATATAAASV
GDAA
|
|---|
| |