Gene Rpic_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0016 
Symbol 
ID6287737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp28338 
End bp29102 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID642623589 
ProductGntR domain protein 
Protein accessionYP_001897613 
Protein GI187927126 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCA TTCCATCCTC CGTCGCGCAA GCACTCCAGC AACGCATCCT GAGTGGCGAG 
TACCCCAGTG GCAGCCGCCT GCCGCCGCAG CGTGAGTTGG CGGAAAGCCT GGGCGTGAGC
CGCGCGTCGT TGCGCGAGGC GCTCACCGTG CTCGAAACGC TGGGCCTGGT GGACATCCTC
CCCAGCCGGG GCGTGGTGGT GCGCGGCCAG AAGTTCGGCG CAGAAGGGGC GAGTGCAGAG
CGCATGCACC GGCCGTTTGC CACGCCCGCG CTGGGCACGC TGTCGCCGCG TCAGTTGATC
GAGCTGCGCC TGGTGCTGGA GCCCGGCTGG ACGGCACTGG CCGCCGCGCG CATGCATGCC
GCCGGCCTGC GCCACCTGCA GTGGTTGCAG CAGCAGTTGG CCCATGCGTT GGAGCGCAAT
GATTTGCTAA GCGCGGCAGA GGCGGATTTG CACTTCCACC TGCTGCTCGC GCAGTTGTCC
GGCAACCCGG GCTTGATGGC AATGGCCGGC CAGTTGGAAC ACGCCATCGG CCACAGCCTG
CGCCTGCCCT TTGCCCGCAA CGGCGCAGAC GACCACCCCG CGCACGAGCA CGACGCCATC
GTGCAGGCCA TTGCCGCGGG CGATGTCGCC GCCAGCGCAG AGGCGATGCG TGCGCATCTG
CTGTCGGCCG CGCGCCGCAG CGGCATTGAT CTGACTGCGC CGCCCGCCAC GCCCGAACCC
ATGCAGCACG AACCGGCTTC CTTTCGCCTC GCCTCGATTT CCTGA
 
Protein sequence
MHSIPSSVAQ ALQQRILSGE YPSGSRLPPQ RELAESLGVS RASLREALTV LETLGLVDIL 
PSRGVVVRGQ KFGAEGASAE RMHRPFATPA LGTLSPRQLI ELRLVLEPGW TALAAARMHA
AGLRHLQWLQ QQLAHALERN DLLSAAEADL HFHLLLAQLS GNPGLMAMAG QLEHAIGHSL
RLPFARNGAD DHPAHEHDAI VQAIAAGDVA ASAEAMRAHL LSAARRSGID LTAPPATPEP
MQHEPASFRL ASIS