Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0016 |
Symbol | |
ID | 6287737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 28338 |
End bp | 29102 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642623589 |
Product | GntR domain protein |
Protein accession | YP_001897613 |
Protein GI | 187927126 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCA TTCCATCCTC CGTCGCGCAA GCACTCCAGC AACGCATCCT GAGTGGCGAG TACCCCAGTG GCAGCCGCCT GCCGCCGCAG CGTGAGTTGG CGGAAAGCCT GGGCGTGAGC CGCGCGTCGT TGCGCGAGGC GCTCACCGTG CTCGAAACGC TGGGCCTGGT GGACATCCTC CCCAGCCGGG GCGTGGTGGT GCGCGGCCAG AAGTTCGGCG CAGAAGGGGC GAGTGCAGAG CGCATGCACC GGCCGTTTGC CACGCCCGCG CTGGGCACGC TGTCGCCGCG TCAGTTGATC GAGCTGCGCC TGGTGCTGGA GCCCGGCTGG ACGGCACTGG CCGCCGCGCG CATGCATGCC GCCGGCCTGC GCCACCTGCA GTGGTTGCAG CAGCAGTTGG CCCATGCGTT GGAGCGCAAT GATTTGCTAA GCGCGGCAGA GGCGGATTTG CACTTCCACC TGCTGCTCGC GCAGTTGTCC GGCAACCCGG GCTTGATGGC AATGGCCGGC CAGTTGGAAC ACGCCATCGG CCACAGCCTG CGCCTGCCCT TTGCCCGCAA CGGCGCAGAC GACCACCCCG CGCACGAGCA CGACGCCATC GTGCAGGCCA TTGCCGCGGG CGATGTCGCC GCCAGCGCAG AGGCGATGCG TGCGCATCTG CTGTCGGCCG CGCGCCGCAG CGGCATTGAT CTGACTGCGC CGCCCGCCAC GCCCGAACCC ATGCAGCACG AACCGGCTTC CTTTCGCCTC GCCTCGATTT CCTGA
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Protein sequence | MHSIPSSVAQ ALQQRILSGE YPSGSRLPPQ RELAESLGVS RASLREALTV LETLGLVDIL PSRGVVVRGQ KFGAEGASAE RMHRPFATPA LGTLSPRQLI ELRLVLEPGW TALAAARMHA AGLRHLQWLQ QQLAHALERN DLLSAAEADL HFHLLLAQLS GNPGLMAMAG QLEHAIGHSL RLPFARNGAD DHPAHEHDAI VQAIAAGDVA ASAEAMRAHL LSAARRSGID LTAPPATPEP MQHEPASFRL ASIS
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