| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0014 |
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| Symbol | |
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| ID | 6289281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 25869 |
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| End bp | 27560 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623587 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_001897611 |
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| Protein GI | 187927124 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACAA CGTTTCTATT GCGCACGCTG CTAGCGAGCG GCATGACTTC TTCTGTTTTC
GCGCAAGTCG CGCCTGCACC CCTCACCGGC CCTGGTCCCG ACGTGCAGCG CTTGCAAGAG
CAGCAAGCCG AGCAGGCGCG CGAGCGTGCC AACGCCCGCC CGGATGTCTT CACGCCACCC
GCACCCGCGC AGGTGATTTC GCTGTCCGCG CTGCCGAAGG AAACGCCATG CTTCCAAATC
AACGGCATCA CGTTGGAGGA CAACGTCTTC TGGTGGTTGC CCGACCTGCT CAAGCCCGTC
AATGGCCAGT GTGTCGGCAA GCAGGGGCTG GAGGCGATCG AGCTGCAGGC AAACAACGCG
CTGATTGAGC GGGGCTACGT CACTTCGCGG GTCCTGATCC CGAAGCAGAA CTTGGCTGGC
GGTACGTTGC AACTCAAGGT GTTGGCGGGG CGCATTGGGG CCATCCGAAA TGCCTCGGAT
AACAACATCG GCTGGGCACG GATGGTGTTG CTCGCTGGCC CCGGAGATTT GTTGAACCAG
CGCGACTTGG ACCAGGCGCT GGAAAGCATT CGCCGCCTGC CGGGTCAGTC GCAGACAAGC
TTTGACATCG TTCCTGGCGA GCGCGTCGGT GAATCTGACA TCGTGCTCAA GCCGGGTACT
GACAAGCGCT GGCACGCATC GCTGTCAGCG GATAACACGG GCTTGAAGTC GACCGGCAAG
TACCAGATGA GCGGCTCGCT GGTCATCGAC TCGCCGCTGC ACCTCTACGA CCAACTGTCG
ATTTCAGCGT CGTCCAATAC AGACCGCGGT TCGACCGCAG CAGGCACGCG TTCCTATTCC
ATCAACTGGA GCGTGCCGGT CGGCTATGCC ACGCTCTTCG TCGGCGCCAA TCGCTCGCGC
TACAACCAGA CGGTGGCGGG TTTCGAGGAG CCCATCGTCT ACAGCGGCAA TAGCTCGGAG
GTGAATGCCG GCATCAGTGG CGTGCTGCAT CGCGACGCGA CGTCGCGCAC CGGCGCCCAG
TTCAAGCTCT TCCGCAAAAT CAACCGCAAC TACCTGGAAG ACACGGAGAT TGCGGTCCAG
CGTCGTGACG TCGTGGGCTA TGAGGCGTCG ATGTCGCATC GCCATTATCT CGGCCCGGTG
GTGCTCGATG GCGGGTTTGC GTGGCGAGAG ACGCTGCCCG ACCATTCCAA CGTGCCGGGC
GTGGTGGTCG GTGACCCTGG CTACGGCGGG CGCTCACAAG TTGAAACGGC CAACGCAAGC
CTGTATTGGC CGTTCAAGCT GGCTAACCAG ATGTTCGAGT ACACGAGCAA CTGGTCTATC
CAGCACGCTC GCACACGTGT GCTGCCCAGC GACTACTTCA CCATCGGTAA CCGCTACACC
GTGCGCGGCT TCGACGGTCA ATTGACGCTG GCGGCTGAAG ACGGATGGTT CTGGCGCAAT
GAACTGGCAT GGCGCGTTGC AGGACAGGCC ATCTATGCCG GGGTCGATAT GGGCAAGGTG
CACGGCCCCA GTGCGGAATT TCTGCTCGGC GACAAGTTGG TGGGTGCCGT CGTTGGTGTG
CGAGGGCGCG TGCCATCCGG GCCCTACATG GCCTTCAACT ACGACGTGTC GTTTGGTTGG
CCGTTGTACA GACCAGCCGG CTTCCGCAGC CAACAGCCAG CAGTGATGGC GCAGGTTGGC
GTGGAGTTTT AG
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| Protein sequence | MRTTFLLRTL LASGMTSSVF AQVAPAPLTG PGPDVQRLQE QQAEQARERA NARPDVFTPP
APAQVISLSA LPKETPCFQI NGITLEDNVF WWLPDLLKPV NGQCVGKQGL EAIELQANNA
LIERGYVTSR VLIPKQNLAG GTLQLKVLAG RIGAIRNASD NNIGWARMVL LAGPGDLLNQ
RDLDQALESI RRLPGQSQTS FDIVPGERVG ESDIVLKPGT DKRWHASLSA DNTGLKSTGK
YQMSGSLVID SPLHLYDQLS ISASSNTDRG STAAGTRSYS INWSVPVGYA TLFVGANRSR
YNQTVAGFEE PIVYSGNSSE VNAGISGVLH RDATSRTGAQ FKLFRKINRN YLEDTEIAVQ
RRDVVGYEAS MSHRHYLGPV VLDGGFAWRE TLPDHSNVPG VVVGDPGYGG RSQVETANAS
LYWPFKLANQ MFEYTSNWSI QHARTRVLPS DYFTIGNRYT VRGFDGQLTL AAEDGWFWRN
ELAWRVAGQA IYAGVDMGKV HGPSAEFLLG DKLVGAVVGV RGRVPSGPYM AFNYDVSFGW
PLYRPAGFRS QQPAVMAQVG VEF
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