| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3986 |
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| Symbol | |
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| ID | 6281385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4464774 |
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| End bp | 4466432 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642623572 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001897596 |
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| Protein GI | 187925954 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCGT CCTATGGGTC ATCTTTTTCA TGTCAGCGGT CATGCTGTTC
GACAACTGGC AACGCGACCA CGGACGCCCG TCGATGTTCT TCCCGAGCGC CACGCCGACC
AAGACCGTCG GTAGCGCCGC ACCGGGAACC ACGACGCCGG GAACCCAGCC CGCCGATCTG
CCGGCAACGA ACGCAGCCGC ACCGGGCAAC GCGCCGGCGG CCACGCAATC GCAACTGGTC
AAGTTCAACA CCGACGTCTA TAGCGGTGAA ATCGACACTC GCGGCGGCAC GCTGTCGAAG
CTGTCGCTCG TGAACAAGGG TGACGGCAAG CAGCCGGACC TCGTCATCAC GCTGTTCGAC
CGCACCGCGA ACCATACGTA TCTGGCGCGC ACGGGCCTGC TCGGCGGCGA TTTCCCGAAT
CACAACGACA TCTACACGCC GTTGCCGAAC CAGCAGCACG ACCTGACGGG CGACGAAAAG
TCGTTCCAGC TCAGCTTCGA GTCGCCGGTG AAGGGTGGCG TGAAGGTCAT CAAGACCTAC
ACGTTCACGC GTGGCAGCTA TGTGATCGGC GTCGACACGA AGATCCAGAA CGTCGGCACT
GCGCCGGTGA CCCCGTCGGT CTATATGGAA CTGGTACGTG ACGATCAGCC GGTGGAAACG
CCGCGCTTCT CGCACACGTT CATCGGACCG GCTGTGTACA CCGACCAGCA TCACTTCCAG
AAGATGACGT TCGGCGACAT CGACAAGAAC AAGCAGGATT ACGCGACCTC GGCCGACAAC
GGCTGGATCG CAATGGTCCA GCATTACTTC GCGTCGGCCT GGATTCCGCA GCAAGGCGTG
AAGCGCGACA TCTACGTCGA GAAGATCGAT CCGGCGCTGT ATCGCGTCGG CGTGAAGGAG
CCGGTGCCGA CCATCGCCCC GGGTCAAACC GTCGACGTGT CCGCTCGTCT GTTCGCGGGT
CCGGAAGAAG AGCGCATGCT CGAAGGCATC GCGCCGGGTC TGGAACTGGT GAAAGACTAC
GGCTGGGTGA CGATCATCGC CAAGCCGCTG TTCTGGCTGC TCGAGAAGAT CCACAGCTAT
GTCGGCAACT GGGGCTGGTC GATCGTGCTG CTCACGCTGC TGATCAAGGC GGTGTTCTTC
CCGCTGTCGG CCGCGAGCTA CAAGTCGATG GCGCGCATGA AGGCGATCAC GCCGCGCATG
CAGGCACTGC GCGAACGCTT CAAGGGCGAC CCGCAGAAGA TGAACTCGGC GCTGATGGAG
TTGTACAAGA CCGAGAAGGT CAATCCGTTC GGCGGCTGTC TGCCGGTCGT GATTCAGATT
CCGGTGTTCA TCTCGCTGTA CTGGGTGCTG CTGTCGTCGG TGGAAATGCG CGGCGCGCCG
TGGATTCTGT GGATTCACGA TCTGTCGCAG CAGGATCCGT TCTTCATCCT GCCGGTGCTG
ATGGCCGTCT CGATGTTCCT GCAGACCAAG CTGAACCCGA CGCCGCCGGA CCCGGTTCAA
GCCAAGATGA TGATGTTCAT GCCGATCGCG TTCTCGGTCA TGTTCTTCTT CTTCCCGGCC
GGTCTGGTGC TGTACTACGT CGTGAACAAC GTGCTGTCGA TCGCCCAGCA GTACTACATC
ACGCGGATGA TGGGGCAGAC GAAGGCCAAA GCGGCTTGA
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| Protein sequence | MDIKRTVLWV IFFMSAVMLF DNWQRDHGRP SMFFPSATPT KTVGSAAPGT TTPGTQPADL
PATNAAAPGN APAATQSQLV KFNTDVYSGE IDTRGGTLSK LSLVNKGDGK QPDLVITLFD
RTANHTYLAR TGLLGGDFPN HNDIYTPLPN QQHDLTGDEK SFQLSFESPV KGGVKVIKTY
TFTRGSYVIG VDTKIQNVGT APVTPSVYME LVRDDQPVET PRFSHTFIGP AVYTDQHHFQ
KMTFGDIDKN KQDYATSADN GWIAMVQHYF ASAWIPQQGV KRDIYVEKID PALYRVGVKE
PVPTIAPGQT VDVSARLFAG PEEERMLEGI APGLELVKDY GWVTIIAKPL FWLLEKIHSY
VGNWGWSIVL LTLLIKAVFF PLSAASYKSM ARMKAITPRM QALRERFKGD PQKMNSALME
LYKTEKVNPF GGCLPVVIQI PVFISLYWVL LSSVEMRGAP WILWIHDLSQ QDPFFILPVL
MAVSMFLQTK LNPTPPDPVQ AKMMMFMPIA FSVMFFFFPA GLVLYYVVNN VLSIAQQYYI
TRMMGQTKAK AA
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