| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3984 |
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| Symbol | trmE |
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| ID | 6281383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4462463 |
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| End bp | 4463857 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623570 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001897594 |
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| Protein GI | 187925952 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCA CCGATTCCGA TCCAATCGTC GCCATTGCCA CCGCGCCCGG CCGGGGAGGC
ATCGGTGTCG TGCGAATTTC GTTCGGCCGT GCGGGAGAGG CGGCCGCCCA GCCACTGATG
CAGGCGCTCA CCGGCCAAAC ATTGGCACCG CGCCACGCCA GCTACGTCCC GTTCCTCGAC
GTCAGCGGCA ACGCGCTCGA CCGCGGCATC GCGCTGTACT TTCCGGCGCC GCATTCCTAC
ACCGGCGAGC ATGTGCTCGA ACTGCAAGGC CACGGCGGTC CGGTAGTGCT GCAACTGGTG
CTGCAGCGTT GCATCGACGC CGGCCGCGCG TTCGGTCTGC GCCTCGCCGA GCCCGGCGAA
TTCACGCGCC GCGCCTTCCT CAACGACAAG CTGGATCTGG CGCAAGCCGA AGCGGTTGCC
GATCTGATCG AGGCCAGCAC CGAGGCCGCG GCACGCTCAG CGGGCCGCTC GCTCGACGGC
GCGTTCTCGC GCGACATTCA CGCGCTGGTC GAAGACGTGA TCACGCTACG CATGCTTGTC
GAAGCGACGC TGGACTTCCC CGAAGAAGAG ATCGACTTCC TCGAAGCCGC CGACGCCCGC
GGCAAGCTCA CGCGCATCCG CGAGCGTCTC GCGCACGTGC TGAGCGAAGC GCGGCAAGGC
GCGTTGTTGC GCGAAGGGCT CTCGGTGGTG CTGGCCGGGC AGCCGAACGT CGGCAAATCG
TCGCTGCTGA ACGCGCTGGC CGGCGCGGAA CTGGCGATCG TCACGCCGAT CGCCGGCACG
ACGCGCGACA AGGTCGCGCA GACCATTCAG ATCGAAGGCA TTCCGCTGCA CGTAATCGAC
ACAGCCGGCC TGCGCGATAC CGAGGACGAA GTCGAAAAGA TCGGCATTGC GCGCACGTGG
AGCGAAATCG AGCGGGCGGA TGTCGTGCTG CATCTGCTCG ACGCGCGCAC CGGCATGACC
GCTGAAGACG ATGCGATTGC CGGACGCTTT CCGCGCGGCG TGCCAGTGGT GCGCGTGCTG
AACAAGACGG ACCTGACCGG CCTCGCGCCG GCGACGCAAG CGCTCGACGC GGACCTCGAA
CTGAGCGAAG TGCGGCTGTC GGCGAAACAG GGCGACGGCG TTGCGCTGTT GCGCGACGAA
CTGTTGCGGA TCGCCGGCTG GCAGGCGGGC GCGGAAAGCG TCTACCTGGC GCGCGAGCGG
CATCTGATTG CACTGCGCGC GGCCGAGGAG CATCTGGCGA CTGCTGCCGC GCACGCCGAT
CAGAACTCGC AGGCGCTTGA TTTGTTCGCG GAGGAACTCA GGCTCGCGCA GGACCAGTTG
AATTCGATCA CCGGTGAGTT CAGTTCGGAT GATCTGCTCG GAGTGATTTT TAGCAGGTTC
TGTATTGGGA AGTGA
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| Protein sequence | MLTTDSDPIV AIATAPGRGG IGVVRISFGR AGEAAAQPLM QALTGQTLAP RHASYVPFLD
VSGNALDRGI ALYFPAPHSY TGEHVLELQG HGGPVVLQLV LQRCIDAGRA FGLRLAEPGE
FTRRAFLNDK LDLAQAEAVA DLIEASTEAA ARSAGRSLDG AFSRDIHALV EDVITLRMLV
EATLDFPEEE IDFLEAADAR GKLTRIRERL AHVLSEARQG ALLREGLSVV LAGQPNVGKS
SLLNALAGAE LAIVTPIAGT TRDKVAQTIQ IEGIPLHVID TAGLRDTEDE VEKIGIARTW
SEIERADVVL HLLDARTGMT AEDDAIAGRF PRGVPVVRVL NKTDLTGLAP ATQALDADLE
LSEVRLSAKQ GDGVALLRDE LLRIAGWQAG AESVYLARER HLIALRAAEE HLATAAAHAD
QNSQALDLFA EELRLAQDQL NSITGEFSSD DLLGVIFSRF CIGK
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