| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3973 |
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| Symbol | |
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| ID | 6280929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4450119 |
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| End bp | 4451207 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623560 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001897584 |
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| Protein GI | 187925942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.415221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTC CTAAGCCGCA TCAGAACGCC GCCGCGCAGG ATTTCGCGTC GGACGCGGTG
GACGCCCCCA ATCTCGCGAT CGACGATGCC CTCGCGCGCA TCCTCGGCAA TCCGCCCGCA
GCCGAGTGCC CGATCATGGT GTTGCTGGTC GACGATCAGG CGATCATCGC CGAGGCGATC
CGCCAGGCGC TGGCCGACGA ACCGAGCGTC GACTTCCACT ACTGCGCCTC GCCTGAAGAA
GCGCTGCGCT CTGCCGCCGA AACGCGCGCG ACGGTGATCC TTCAGGACCT CGTGATGCCG
GGCACCGACG GCCTCACCCT CGTGCGCCAG TACCGGCAGA ATGCGGCGAC GCGCGACATT
CCGATCATCG TCTTGTCGAC CAAGGAAGAG CCGCTCGTGA AAAGCGCGGC CTTCGCCGCC
GGCGCGAACG ACTATCTGGT GAAGCTGCCG GACCGCATCG AGTTGATTGC GCGCATCCGC
TATCACTCGC GTTCGTACCT GAACCTGATT CAACGCGACG AGGCCTACCG GGCGCTGCGT
CAATCGCAGC AGCAATTGCT CGCGACGAAT CTGGAATTGC AAAGGCTCAC GCATTCGGAC
GGCCTGACGG GCCTGTCGAA TCGCCGCTAC CTCGATCAAT ATCTGGCCGC CGAATGGCGT
CGCAGCACAC GCGAGAAGAC CGGCCTCGGT TTTCTGATGA TCGATGTGGA CAACTTCAAG
GCTTATAACG ATACCTACGG GCACGTTGCC GGCGACGAAG TCCTCAAGAC AGTCGCGCAT
ACCGTCGAAT CGTGCCTCGG GCGCCCGGCG GATCTCGCGG CGCGCTTCGG TGGCGAAGAG
TTCGCGGTGG TGGTGCCGGG CACGTCGTCG GGCGGCTTGC GTCTGCTCGC GGAAAAGATC
CGCATTGCAA TCGAAGGCCT GGCGATCCCG CATTCGGGCT CCGCCACCGG CATCGTGACG
ATCAGCATCG GCGCGGCGAC GCTCGTGCCC ACGGTCGCCG AACCGGTGAC GAAGCTGATC
GAAGCGGCTG ATGTCGGCTT GTATCGCGCG AAGCGGGATG GGAAGAATCA GGTTGCGGTG
AGCGATTGA
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| Protein sequence | MDTPKPHQNA AAQDFASDAV DAPNLAIDDA LARILGNPPA AECPIMVLLV DDQAIIAEAI
RQALADEPSV DFHYCASPEE ALRSAAETRA TVILQDLVMP GTDGLTLVRQ YRQNAATRDI
PIIVLSTKEE PLVKSAAFAA GANDYLVKLP DRIELIARIR YHSRSYLNLI QRDEAYRALR
QSQQQLLATN LELQRLTHSD GLTGLSNRRY LDQYLAAEWR RSTREKTGLG FLMIDVDNFK
AYNDTYGHVA GDEVLKTVAH TVESCLGRPA DLAARFGGEE FAVVVPGTSS GGLRLLAEKI
RIAIEGLAIP HSGSATGIVT ISIGAATLVP TVAEPVTKLI EAADVGLYRA KRDGKNQVAV
SD
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