Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3963 |
Symbol | |
ID | 6284558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4439758 |
End bp | 4441491 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623550 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001897574 |
Protein GI | 187925932 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT CGAACCAGAC TAAAAAGCCG CTACGCAGCC AGGCGTGGTT CGGCCTCAAG GACCGCGACG GTTTTCTACA TCGCTCGTGG ATGAAAAACC AGGGCATCCC GCACGACGAA TTCGACGGAC GCCCGGTGAT CGGCATTTGC AACACGTGGT CGGAACTGAC GCCGTGCAAC GCGCATTTTC GCGAGCTGGC GGAGTACGTG AAGAAAGGCG TGCATGAAGC CGGCGGCTTG CCGCTCGAGT TTCCCGTGAT GTCGCTCGGC GAGACCAATT TGCGGCCTAC TGCGATGCTG TTTCGCAACC TCGCCTCCAT GGATGTCGAG GAGTCGATTC GCGGCAATCC GATGGACGGC GTGATTCTGC TGGTCGGCTG CGACAAGACC ACGCCCGCGC TGCTGATGGG CGCGGCGTCG TGCAATCTGC CCGCGCTGGC CGTTTCCGGC GGCCCGATGC TCAACGGCCG GTTTCGCGGC AAGAACATCG GCTCTGGCAC GGGCGTCTGG CAGATGTCCG AGGAAGTGCG CGCCGGCACG ATGACGCAGG AAGAATTCAC CGAAGCCGAG TCGTGCATGA ACCGCTCGCG CGGCCACTGC ATGACGATGG GCACGGCGTC GACCATGGCC TCGATGGTCG AATCGCTCGG CATGGGCTTG CCGCACAACG CGGCGATTCC GGCCGTCGAC GCGCGCCGCC AGGTGCTCGC GCATCTCGCG GGCCGGCGCA TCGTCGACAT GGTTCGCGAG GATCTGACGA TGGACAAGAT CCTCACGCGC CAGGCCTTCG AAAACGCGAT CCGCACGAAT GCGGCGATCG GCGGCTCGAC CAATGCGGTC GTCCATCTGA TCGCGCTGGC CAAGCGCATT GGCGTGGAGT TGTCGCTGGA GGATTGGGAG CTGGGATCGA ACGTGCCGTG TCTCGTGAAT CTGCAACCGT CCGGTGAATA TCTGATGGAG GACTTTTACT ACGCGGGCGG TTTGCCGGCG GTGTTGAAGC AACTCGGCGA GCAAGGGCTC TTGCACAAAG AAGCGTTGAC CGTGAACGGC AAGACCCTTT GGGACAACGT GCGCAATGCG GCGAATTACG ACGAGAAGGT CATCACGACC TTCGCCGAGC CGTTCAAGCC GAAGGCCGGT ATCGCGGTGC TCAAGGGCAA CCTCGCGCCG AATGGCGCGG TGATCAAGCC GTCGGCGGCA ACGGCGTCGT TGCTCAAGCA TCGCGGTCGC GCGGTGGTGT TCGAGAACAT CGAGGAACTG CACGCCAAGA TTGACGACGA GTCGCTCGAT ATCGACGAGC ATTGCATCAT GGTGCTCAAG GGCGCGGGGC CGAAGGGTTA TCCGGGCTTC GCGGAAGTCG GCAATATGCC GCTACCGAAA AAGGTGCTGC AAAAAGGCAT CACGGACATG GTGCGCATTT CCGACGGCCG CATGAGCGGC ACGGCGTACG GCGCGGTGGT GCTGCATGTG TCGCCGGAAG CGGCCGCGGG CGGCCCGCTC GCGTTCGTGC AGACCGGCGA CATGATCGAA CTGGACGTCG AAGAACGCCG CCTGCACCTC GACGTCACCG ACGAGGAACT CGCACGCCGG CGCGCCGCAT GGCAGGCGCC CGAGGCGCCA AAACGCGGCT ACTACAAGCT CTACGTCGAG CACGTGCTGC AAGCGGACCA GGGCGCGGAT CTCGACTTTC TGGTGGGATC GAGCGGCGCT CCGGTGCCGC GCGATTCACA CTGA
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Protein sequence | MADSNQTKKP LRSQAWFGLK DRDGFLHRSW MKNQGIPHDE FDGRPVIGIC NTWSELTPCN AHFRELAEYV KKGVHEAGGL PLEFPVMSLG ETNLRPTAML FRNLASMDVE ESIRGNPMDG VILLVGCDKT TPALLMGAAS CNLPALAVSG GPMLNGRFRG KNIGSGTGVW QMSEEVRAGT MTQEEFTEAE SCMNRSRGHC MTMGTASTMA SMVESLGMGL PHNAAIPAVD ARRQVLAHLA GRRIVDMVRE DLTMDKILTR QAFENAIRTN AAIGGSTNAV VHLIALAKRI GVELSLEDWE LGSNVPCLVN LQPSGEYLME DFYYAGGLPA VLKQLGEQGL LHKEALTVNG KTLWDNVRNA ANYDEKVITT FAEPFKPKAG IAVLKGNLAP NGAVIKPSAA TASLLKHRGR AVVFENIEEL HAKIDDESLD IDEHCIMVLK GAGPKGYPGF AEVGNMPLPK KVLQKGITDM VRISDGRMSG TAYGAVVLHV SPEAAAGGPL AFVQTGDMIE LDVEERRLHL DVTDEELARR RAAWQAPEAP KRGYYKLYVE HVLQADQGAD LDFLVGSSGA PVPRDSH
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