| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3961 |
|---|
| Symbol | araG |
|---|
| ID | 6284556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4437081 |
|---|
| End bp | 4438628 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642623548 |
|---|
| Product | L-arabinose transporter ATP-binding protein |
|---|
| Protein accession | YP_001897572 |
|---|
| Protein GI | 187925930 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCTT CACACACCGA GTCCCACGCT GCGCAAGCAG CGCCCTCGCC CGCGCTCGCC
TCCACCGAGC CCTATCTGCG GCTCGACGGC ATCACCGTGC GCTTTCCCGG CGTGCTCGCG
CTCGACCAGG TGTCGCTCGA AGTGCGGCGC GGCGAAGTGC ACGGCTTGAT GGGCGAAAAC
GGCGCCGGCA AGTCGACGCT GCTCAAGGTG CTGTCCGGCG TGAATCAACC GGCGGCGGGC
ACCTTGTCGC TCGATGGCGT CGAACAGCAA TTCATCACGA CCAAAGCCGC GATTGCCGCG
GGCGTGGCGA TCATCTATCA GGAACTGCAT CTCGTGCCGG AACTGACGGT TGCGGAAAAT
CTGATGCTCG GTGCCCTGCC GAATCGCTTC GGCATACTGG ACGAAAAAGC GCTGGTCGCG
CGTGCCGTGC GGGAACTGGA ACGGCTCGGC GAAAAAATCG ATCCGTCGCA GCAGGTCAAG
AATCTTTCGA TCGGCCAGCG GCAAATGATC GAAATCGGCA AGGCGCTGAT GCGCGACGCG
CGCGTGATCG CGTTCGACGA ACCGACCAGT TCGCTGTCGT CGCGCGAGAC GACGCAGCTC
TTCCGGATCA TTCGCGCGTT GAAGGCCGAA GGCCGCGCGA TCATCTATGT CACGCATCGG
ATGGATGAAG TCTACGAACT GTGCGATCGC GTCACCGTGT TTCGCGACGG TCGCCGCATC
GATACATTTG AAGCGGGTGA AGGACTCGAC CGTGATCGCC TGATCAGCTG CATGGTGGGC
CGTTCGATCG CCGACGTGTA CGGCTATCGC TCGCGCGATC TCGGCGACGT GCAACTCGAC
GTGAAGGAAA TGATGGGACG CGGGCTGCGC GAGCCGGCTT CTTTCACGGC ACGCAAAGGC
GAAATCGTCG GCTTCTTCGG GCTAGTCGGC GCGGGACGCT CCGAGCTGAT GAAGCTCATC
TATGGCGCGG TCAAACCGGA TGCCGGGGAG ATTGCGCTCA AAGGCAAGCG CGTGCGTTTT
GCCACACCGC GTGACGCCGT GCGCGCGGGC GTGGCGTTGT GTCCCGAAGA CCGTAAGCAG
GAAGGCATCG TTTCGATCGC CTCGGTATCG GACAACCTCA ACATCAGCTG CCGGCGCCAT
TTCAGCCGCT TCAACGTGCT CAACGGACGC AAGGAAGCGC AGACCGCCAA AGAGTTCATC
GGCAAGCTTG CGATCAAGAC GCGCAATGGC GATACGCCGA TCGGCACGCT GTCCGGCGGC
AATCAGCAGA AGGTGATTCT GTCGCGCTGG CTTGCCGAAG ACATCGACGT TTTCCTCATG
GACGAACCCA CGCGCGGCAT CGACGTCGGC GCGCGCAGCG AGATTTATGG GCTGCTGTAT
GGGCTCGCCG AAGCGGGCCG CACGGTGATC GTCGTGTCGA GCGATCTCGC GGAAGTGATC
GGGGTGGCGG ATCGCGTGAT CGTGATGAAA GAAGGCCGCA TCGTCGGCGA TCTGCCCAAG
GCGCAGGCCA CGCCGGATGC GCTGATCAAG CTCGCCCTGC CCCGTTGA
|
|---|
| Protein sequence | MTSSHTESHA AQAAPSPALA STEPYLRLDG ITVRFPGVLA LDQVSLEVRR GEVHGLMGEN
GAGKSTLLKV LSGVNQPAAG TLSLDGVEQQ FITTKAAIAA GVAIIYQELH LVPELTVAEN
LMLGALPNRF GILDEKALVA RAVRELERLG EKIDPSQQVK NLSIGQRQMI EIGKALMRDA
RVIAFDEPTS SLSSRETTQL FRIIRALKAE GRAIIYVTHR MDEVYELCDR VTVFRDGRRI
DTFEAGEGLD RDRLISCMVG RSIADVYGYR SRDLGDVQLD VKEMMGRGLR EPASFTARKG
EIVGFFGLVG AGRSELMKLI YGAVKPDAGE IALKGKRVRF ATPRDAVRAG VALCPEDRKQ
EGIVSIASVS DNLNISCRRH FSRFNVLNGR KEAQTAKEFI GKLAIKTRNG DTPIGTLSGG
NQQKVILSRW LAEDIDVFLM DEPTRGIDVG ARSEIYGLLY GLAEAGRTVI VVSSDLAEVI
GVADRVIVMK EGRIVGDLPK AQATPDALIK LALPR
|
|---|
| |