Gene Bphyt_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3955 
Symbol 
ID6283719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4430519 
End bp4431694 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID642623542 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001897566 
Protein GI187925924 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000156521 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.830157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA AATCTACCGA TACCGCCGCC GCCGCGAGCT GGACTTGCGA CGACGCGCGC 
TGGGAAGCCG TCACGCACCG CGAATCGCAA GCCGACGGCG CGTTCTTCTA TGCCGTCAAA
ACGACCGGCG TGTTCTGCCG TCCGTCGTGC GCCTCGCGCC TGCCGCGCCG TGAGAACGTC
GCCTTCTTCA CCGATGCCGC CGCCGCGCGC GCCGCGGGCT TTCGCGATTG CAAGCGCTGC
CAGCCCGGCG GCCTGCCGCG CGAGCTGGAA ATCGTGAACC GGGCGTGCGC CGCGCTGGAC
GCCGACCCGC AAGAGCGCCT CACGCTCGCG CAATTGAGCG ACGCCGTGCA CGTCAGCCCA
TTCCATCTGC AGCGTCTTTT CAAGCGGGTC GTGGGAGTGT CGCCGCGTCA ATATCAGGCC
GCGCAGCGGG GCGCCGCCTT GCGCGACGCG CTCCAGAGCG GCTCGGACGT CACGCGCGCC
ACGCTCGACG CGGGCTTCGG CTCGCCGTCG CGCATGTACG ACAGCGCATC CGCCGAGCTG
GGCATGGCAC CGTCCGCCTA TCGCCGCAAG GGCGCCGGAC TCATCGTTCG CTACGCCAGC
GCGCCGACCT CGCTCGGTCA TGTACTGGTC GCGGCGACGG AGAAGGGCAT CTGCAAAATC
GGTTTCGGCG ACGACAAAGC CATGCTCGCC GATGACCTGC GCGGCGAATT CGCCAACGCC
GACGTGTTGG AAGATCCCGA ACACATGGCG CCGTTCATCG CCCAGATCGA CGCCTATTTG
CGCGGCACGC GTCAAGATTT CGATCTGCCG CTGGACATCG CCTCGACGGC ATTCAGGCAG
CGTGTGTGGG ACGCGTTGCG GCGCATCCCG TACGGTGAGA CACGCAGTTA TTCGCAGATC
GCCGAGACGG TCGGCGCGCC CCGCGCGGTG CGCGCGGTGG CCAGCGCGTG CGCGACGAAT
CCGGTGGCAC TGGCAATTCC TTGTCATCGT GTGGTGGCCA AGGGCGGAGC GTTGGCGGGG
TATCGCTGGG GTTTGCCACG CAAGGCCGCG CTGCTGGACA ACGAGGCGCA GCATGCCGGC
GACTTTTCAG GCGGCCAAGC CGAGCGCAAC CGTCGCGCCG ATGCAGACTC TGACCTCGAT
ATCAAAACCA CCACCAAACT GGACCACGCC GCGTGA
 
Protein sequence
MNRKSTDTAA AASWTCDDAR WEAVTHRESQ ADGAFFYAVK TTGVFCRPSC ASRLPRRENV 
AFFTDAAAAR AAGFRDCKRC QPGGLPRELE IVNRACAALD ADPQERLTLA QLSDAVHVSP
FHLQRLFKRV VGVSPRQYQA AQRGAALRDA LQSGSDVTRA TLDAGFGSPS RMYDSASAEL
GMAPSAYRRK GAGLIVRYAS APTSLGHVLV AATEKGICKI GFGDDKAMLA DDLRGEFANA
DVLEDPEHMA PFIAQIDAYL RGTRQDFDLP LDIASTAFRQ RVWDALRRIP YGETRSYSQI
AETVGAPRAV RAVASACATN PVALAIPCHR VVAKGGALAG YRWGLPRKAA LLDNEAQHAG
DFSGGQAERN RRADADSDLD IKTTTKLDHA A