Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3955 |
Symbol | |
ID | 6283719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4430519 |
End bp | 4431694 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642623542 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001897566 |
Protein GI | 187925924 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase [COG2169] Adenosine deaminase |
TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000156521 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.830157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA AATCTACCGA TACCGCCGCC GCCGCGAGCT GGACTTGCGA CGACGCGCGC TGGGAAGCCG TCACGCACCG CGAATCGCAA GCCGACGGCG CGTTCTTCTA TGCCGTCAAA ACGACCGGCG TGTTCTGCCG TCCGTCGTGC GCCTCGCGCC TGCCGCGCCG TGAGAACGTC GCCTTCTTCA CCGATGCCGC CGCCGCGCGC GCCGCGGGCT TTCGCGATTG CAAGCGCTGC CAGCCCGGCG GCCTGCCGCG CGAGCTGGAA ATCGTGAACC GGGCGTGCGC CGCGCTGGAC GCCGACCCGC AAGAGCGCCT CACGCTCGCG CAATTGAGCG ACGCCGTGCA CGTCAGCCCA TTCCATCTGC AGCGTCTTTT CAAGCGGGTC GTGGGAGTGT CGCCGCGTCA ATATCAGGCC GCGCAGCGGG GCGCCGCCTT GCGCGACGCG CTCCAGAGCG GCTCGGACGT CACGCGCGCC ACGCTCGACG CGGGCTTCGG CTCGCCGTCG CGCATGTACG ACAGCGCATC CGCCGAGCTG GGCATGGCAC CGTCCGCCTA TCGCCGCAAG GGCGCCGGAC TCATCGTTCG CTACGCCAGC GCGCCGACCT CGCTCGGTCA TGTACTGGTC GCGGCGACGG AGAAGGGCAT CTGCAAAATC GGTTTCGGCG ACGACAAAGC CATGCTCGCC GATGACCTGC GCGGCGAATT CGCCAACGCC GACGTGTTGG AAGATCCCGA ACACATGGCG CCGTTCATCG CCCAGATCGA CGCCTATTTG CGCGGCACGC GTCAAGATTT CGATCTGCCG CTGGACATCG CCTCGACGGC ATTCAGGCAG CGTGTGTGGG ACGCGTTGCG GCGCATCCCG TACGGTGAGA CACGCAGTTA TTCGCAGATC GCCGAGACGG TCGGCGCGCC CCGCGCGGTG CGCGCGGTGG CCAGCGCGTG CGCGACGAAT CCGGTGGCAC TGGCAATTCC TTGTCATCGT GTGGTGGCCA AGGGCGGAGC GTTGGCGGGG TATCGCTGGG GTTTGCCACG CAAGGCCGCG CTGCTGGACA ACGAGGCGCA GCATGCCGGC GACTTTTCAG GCGGCCAAGC CGAGCGCAAC CGTCGCGCCG ATGCAGACTC TGACCTCGAT ATCAAAACCA CCACCAAACT GGACCACGCC GCGTGA
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Protein sequence | MNRKSTDTAA AASWTCDDAR WEAVTHRESQ ADGAFFYAVK TTGVFCRPSC ASRLPRRENV AFFTDAAAAR AAGFRDCKRC QPGGLPRELE IVNRACAALD ADPQERLTLA QLSDAVHVSP FHLQRLFKRV VGVSPRQYQA AQRGAALRDA LQSGSDVTRA TLDAGFGSPS RMYDSASAEL GMAPSAYRRK GAGLIVRYAS APTSLGHVLV AATEKGICKI GFGDDKAMLA DDLRGEFANA DVLEDPEHMA PFIAQIDAYL RGTRQDFDLP LDIASTAFRQ RVWDALRRIP YGETRSYSQI AETVGAPRAV RAVASACATN PVALAIPCHR VVAKGGALAG YRWGLPRKAA LLDNEAQHAG DFSGGQAERN RRADADSDLD IKTTTKLDHA A
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