Gene Bphyt_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3953 
Symbol 
ID6283717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4427667 
End bp4429283 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content63% 
IMG OID642623540 
Productglutamate--cysteine ligase 
Protein accessionYP_001897564 
Protein GI187925922 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2918] Gamma-glutamylcysteine synthetase 
TIGRFAM ID[TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.124779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACA CGACACCTTC CCGCACGACC GACGCGTTCT CGCACCGCCT GTCCGTGCTG 
ACCTCAGGCC CGCAGCGCGA CGCGCTGATA CGCGGCCTGC GCGGCATCGA AAAGGAAAGC
CTGCGCGTGA CGCACGAGGG CAAGCTCGCC TTGACGCCGC ATTCGCGCGC GCTCGGTTCG
GCGCTTACGC ATCCATCGCT CACTACTGAC TATTCCGAGG CGCTGCTCGA ACTGATCACG
CCGGCTGAGC ACGACGTCGC GCTGACGCTC GAGAAGCTCG ACACGCTCCA CCGTTTTGTC
TACGCACAAC TCGGCGACGA GATCCTGTGG AACAACTCCA TGCCGGGTCT GCTGCCCGAC
ACGGACGACG GCATTCCGAT CGCGCACTAC GGCACTTCGA ACATCGGCAA GCTGAAGTAC
GTGTACCGCA TCGGCCTCGC GCTTCGCTAC GGCCGCACGA TGCAGTGCAT CGCGGGCATC
CACTACAACT ATTCGCTGAA CGAAGAAGTG TGGCGGCTGC TGCATGCGGA CCAGCAGTCC
ACCGCGAACG CGGTCGACTT CCAGTCCGAC CGCTATCTCG CGCTGATCCG CAACTTCCGC
CGCACCAACT GGCTGTTGAT GTATCTGTTC GGCGCATCGC CGGCGCTGGA TCGGCGTTTT
CTCCGCGATC GCAAACACAC ACTCGATTCG CTCGACGCCG ACACGCTCTA TCGTCCGTAC
GCAACCAGTT TGCGCATGAG CGACCTCGGC TATTCGAACA CTACGGCGCA AGCCGAATTG
CACGCCGATT ACGACACGCT GCCCGGCTAC CTCGACGCGC TCGCGAAAGC CGTGAGCCAG
CCGTATCCCG CGTACGAGGC AATCGGCACG CAACGCGACG GCGAGTGGGT GCAGATCAAC
ACCAACGTGC TGCAGATCGA GAACGAGTTC TACTCGACGA TCCGTCCGAA GCGCATCACG
CATCCAGGCG AGCGTCCGCT GCATGCGCTG GCCGCGCGCG GCGTGCAATA CGTGGAAGTG
CGTTGCATGG ACATCGACCC GTTCGAGCCG ACCGGCATTT CGCTCGAGAC GTCGCGCTTT
CTCGACGCCT ACCTGCTGGT CTGCGCGCTC GACGACAGCG CGCTGTTACC GCCTGATGCT
TATGCCGAAG CCAACCAGAA TTTCGGCCGC GTGACCATGG AAGGGCGCAA GCCGGGCCTC
GAACTGACGC GCGACGGCCA ACCGGTTGCG ATGACGGACT GGGCGAACGA GTTGCTCATC
AAGATCGACG CGGCCGCGGC CGCACTGGAC ACTTTGCATG GCGGCGATGC GCATGCACGC
GCCGTCGCGG TTCAGCGCGC GAAGCTGGCG GATGCATCGC TGACGCCGTC GGCGCGCGTG
CTGCAGACCA TGCGCGAGAA GCAGCAGAGC TTCCTCGCAT TCGGTCTTGA ACAAAGCGAG
GCACACGCCG CGTATTTCCG CGCGCGTCCG CTGGATGCAG AGCAGACCCA GGCTTTCACC
GATCTGGCCG CACAATCGCT CGCCGAGCAA GCCAAACTCG AACAGGAAGA AGTCGGTTCG
TTCGACGCGT TCGTCGCCGC GTATCGGGCG TACACGCTAA ACCGGTTCAG TGTCTGA
 
Protein sequence
MPNTTPSRTT DAFSHRLSVL TSGPQRDALI RGLRGIEKES LRVTHEGKLA LTPHSRALGS 
ALTHPSLTTD YSEALLELIT PAEHDVALTL EKLDTLHRFV YAQLGDEILW NNSMPGLLPD
TDDGIPIAHY GTSNIGKLKY VYRIGLALRY GRTMQCIAGI HYNYSLNEEV WRLLHADQQS
TANAVDFQSD RYLALIRNFR RTNWLLMYLF GASPALDRRF LRDRKHTLDS LDADTLYRPY
ATSLRMSDLG YSNTTAQAEL HADYDTLPGY LDALAKAVSQ PYPAYEAIGT QRDGEWVQIN
TNVLQIENEF YSTIRPKRIT HPGERPLHAL AARGVQYVEV RCMDIDPFEP TGISLETSRF
LDAYLLVCAL DDSALLPPDA YAEANQNFGR VTMEGRKPGL ELTRDGQPVA MTDWANELLI
KIDAAAAALD TLHGGDAHAR AVAVQRAKLA DASLTPSARV LQTMREKQQS FLAFGLEQSE
AHAAYFRARP LDAEQTQAFT DLAAQSLAEQ AKLEQEEVGS FDAFVAAYRA YTLNRFSV