Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3953 |
Symbol | |
ID | 6283717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4427667 |
End bp | 4429283 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623540 |
Product | glutamate--cysteine ligase |
Protein accession | YP_001897564 |
Protein GI | 187925922 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.124779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACA CGACACCTTC CCGCACGACC GACGCGTTCT CGCACCGCCT GTCCGTGCTG ACCTCAGGCC CGCAGCGCGA CGCGCTGATA CGCGGCCTGC GCGGCATCGA AAAGGAAAGC CTGCGCGTGA CGCACGAGGG CAAGCTCGCC TTGACGCCGC ATTCGCGCGC GCTCGGTTCG GCGCTTACGC ATCCATCGCT CACTACTGAC TATTCCGAGG CGCTGCTCGA ACTGATCACG CCGGCTGAGC ACGACGTCGC GCTGACGCTC GAGAAGCTCG ACACGCTCCA CCGTTTTGTC TACGCACAAC TCGGCGACGA GATCCTGTGG AACAACTCCA TGCCGGGTCT GCTGCCCGAC ACGGACGACG GCATTCCGAT CGCGCACTAC GGCACTTCGA ACATCGGCAA GCTGAAGTAC GTGTACCGCA TCGGCCTCGC GCTTCGCTAC GGCCGCACGA TGCAGTGCAT CGCGGGCATC CACTACAACT ATTCGCTGAA CGAAGAAGTG TGGCGGCTGC TGCATGCGGA CCAGCAGTCC ACCGCGAACG CGGTCGACTT CCAGTCCGAC CGCTATCTCG CGCTGATCCG CAACTTCCGC CGCACCAACT GGCTGTTGAT GTATCTGTTC GGCGCATCGC CGGCGCTGGA TCGGCGTTTT CTCCGCGATC GCAAACACAC ACTCGATTCG CTCGACGCCG ACACGCTCTA TCGTCCGTAC GCAACCAGTT TGCGCATGAG CGACCTCGGC TATTCGAACA CTACGGCGCA AGCCGAATTG CACGCCGATT ACGACACGCT GCCCGGCTAC CTCGACGCGC TCGCGAAAGC CGTGAGCCAG CCGTATCCCG CGTACGAGGC AATCGGCACG CAACGCGACG GCGAGTGGGT GCAGATCAAC ACCAACGTGC TGCAGATCGA GAACGAGTTC TACTCGACGA TCCGTCCGAA GCGCATCACG CATCCAGGCG AGCGTCCGCT GCATGCGCTG GCCGCGCGCG GCGTGCAATA CGTGGAAGTG CGTTGCATGG ACATCGACCC GTTCGAGCCG ACCGGCATTT CGCTCGAGAC GTCGCGCTTT CTCGACGCCT ACCTGCTGGT CTGCGCGCTC GACGACAGCG CGCTGTTACC GCCTGATGCT TATGCCGAAG CCAACCAGAA TTTCGGCCGC GTGACCATGG AAGGGCGCAA GCCGGGCCTC GAACTGACGC GCGACGGCCA ACCGGTTGCG ATGACGGACT GGGCGAACGA GTTGCTCATC AAGATCGACG CGGCCGCGGC CGCACTGGAC ACTTTGCATG GCGGCGATGC GCATGCACGC GCCGTCGCGG TTCAGCGCGC GAAGCTGGCG GATGCATCGC TGACGCCGTC GGCGCGCGTG CTGCAGACCA TGCGCGAGAA GCAGCAGAGC TTCCTCGCAT TCGGTCTTGA ACAAAGCGAG GCACACGCCG CGTATTTCCG CGCGCGTCCG CTGGATGCAG AGCAGACCCA GGCTTTCACC GATCTGGCCG CACAATCGCT CGCCGAGCAA GCCAAACTCG AACAGGAAGA AGTCGGTTCG TTCGACGCGT TCGTCGCCGC GTATCGGGCG TACACGCTAA ACCGGTTCAG TGTCTGA
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Protein sequence | MPNTTPSRTT DAFSHRLSVL TSGPQRDALI RGLRGIEKES LRVTHEGKLA LTPHSRALGS ALTHPSLTTD YSEALLELIT PAEHDVALTL EKLDTLHRFV YAQLGDEILW NNSMPGLLPD TDDGIPIAHY GTSNIGKLKY VYRIGLALRY GRTMQCIAGI HYNYSLNEEV WRLLHADQQS TANAVDFQSD RYLALIRNFR RTNWLLMYLF GASPALDRRF LRDRKHTLDS LDADTLYRPY ATSLRMSDLG YSNTTAQAEL HADYDTLPGY LDALAKAVSQ PYPAYEAIGT QRDGEWVQIN TNVLQIENEF YSTIRPKRIT HPGERPLHAL AARGVQYVEV RCMDIDPFEP TGISLETSRF LDAYLLVCAL DDSALLPPDA YAEANQNFGR VTMEGRKPGL ELTRDGQPVA MTDWANELLI KIDAAAAALD TLHGGDAHAR AVAVQRAKLA DASLTPSARV LQTMREKQQS FLAFGLEQSE AHAAYFRARP LDAEQTQAFT DLAAQSLAEQ AKLEQEEVGS FDAFVAAYRA YTLNRFSV
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