Gene Bphyt_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3952 
Symbol 
ID6283716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4426957 
End bp4427628 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID642623539 
Producthypothetical protein 
Protein accessionYP_001897563 
Protein GI187925921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.243316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTT TTTTGTTCAT GCCGGTAACG TCTACGCAAT GTGCCGTGCG CTCCGACGCC 
ATCGGCAAAT ACTCCGCGCG TTCCGACGAT TCTCTGATCC AGATGAAACA CCGTACTCGC
GCCGTAGTCC AAACTGACAT GACGCGCACC ACAGAGGGAG GATTCAACGT GATGAAGAAA
AGTCTGTTGG CCATGCTGTG CGTAGCGGCG GCGGGATGTT CGACGCAAGG GCAGGTCGAT
CCGGACGTCA TGCAGATCGC GACCACGCCG CTGACGTGTT CGAACAAAAC GGAATGCGAT
GTCTGGTGGC AACGGGCGCA AGCGTGGGTG GCGAGCCATT CGACCTACAA GATCGATGCC
TCGACCGACA CGTTGATCCA GACCGCCGGC CCGGATGGCG GCAAGCGCGC GTTGGCGTAT
CAGATTACGC GCGCCGCGAA TCCGGACGGC ACGGCAACGA TCGGTTTCGC CGCGCATTGC
GACGGTTCGA TGGGCTGCAA GCCGAACCCA TGGGAAGCCG GCGCCGACTT CAAGCAATAC
GTTCGAGGCA CTGCAGCCGG CGCACCGCAA AGCGGCGCTA AACCCTCGCA AGCCGCGCCG
GCGACGCCGC ATCCGGACGC CATGCAGGGT CAATCGATCC CGGCGACGAA TGGCGAAGCC
GTCACGCAAT AA
 
Protein sequence
MAVFLFMPVT STQCAVRSDA IGKYSARSDD SLIQMKHRTR AVVQTDMTRT TEGGFNVMKK 
SLLAMLCVAA AGCSTQGQVD PDVMQIATTP LTCSNKTECD VWWQRAQAWV ASHSTYKIDA
STDTLIQTAG PDGGKRALAY QITRAANPDG TATIGFAAHC DGSMGCKPNP WEAGADFKQY
VRGTAAGAPQ SGAKPSQAAP ATPHPDAMQG QSIPATNGEA VTQ