Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3952 |
Symbol | |
ID | 6283716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4426957 |
End bp | 4427628 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623539 |
Product | hypothetical protein |
Protein accession | YP_001897563 |
Protein GI | 187925921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.243316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTT TTTTGTTCAT GCCGGTAACG TCTACGCAAT GTGCCGTGCG CTCCGACGCC ATCGGCAAAT ACTCCGCGCG TTCCGACGAT TCTCTGATCC AGATGAAACA CCGTACTCGC GCCGTAGTCC AAACTGACAT GACGCGCACC ACAGAGGGAG GATTCAACGT GATGAAGAAA AGTCTGTTGG CCATGCTGTG CGTAGCGGCG GCGGGATGTT CGACGCAAGG GCAGGTCGAT CCGGACGTCA TGCAGATCGC GACCACGCCG CTGACGTGTT CGAACAAAAC GGAATGCGAT GTCTGGTGGC AACGGGCGCA AGCGTGGGTG GCGAGCCATT CGACCTACAA GATCGATGCC TCGACCGACA CGTTGATCCA GACCGCCGGC CCGGATGGCG GCAAGCGCGC GTTGGCGTAT CAGATTACGC GCGCCGCGAA TCCGGACGGC ACGGCAACGA TCGGTTTCGC CGCGCATTGC GACGGTTCGA TGGGCTGCAA GCCGAACCCA TGGGAAGCCG GCGCCGACTT CAAGCAATAC GTTCGAGGCA CTGCAGCCGG CGCACCGCAA AGCGGCGCTA AACCCTCGCA AGCCGCGCCG GCGACGCCGC ATCCGGACGC CATGCAGGGT CAATCGATCC CGGCGACGAA TGGCGAAGCC GTCACGCAAT AA
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Protein sequence | MAVFLFMPVT STQCAVRSDA IGKYSARSDD SLIQMKHRTR AVVQTDMTRT TEGGFNVMKK SLLAMLCVAA AGCSTQGQVD PDVMQIATTP LTCSNKTECD VWWQRAQAWV ASHSTYKIDA STDTLIQTAG PDGGKRALAY QITRAANPDG TATIGFAAHC DGSMGCKPNP WEAGADFKQY VRGTAAGAPQ SGAKPSQAAP ATPHPDAMQG QSIPATNGEA VTQ
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