Gene Bphyt_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3947 
Symbol 
ID6284722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4421265 
End bp4422044 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID642623534 
Productputative general secretory pathway protein N 
Protein accessionYP_001897558 
Protein GI187925916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.506993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.535358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACT GGATGCGGCG CTTGCGCGTC GCGCTGCCCT GGCTGGTAGT CGCGGTGCTG 
TCCGCCGCGG CCGTGATGCT GACGATGCTG CCGGCCGCCT GGATCACCCC GCAGTTCGCC
AAAAAGACGG GCGGCCACGT CAATCTCGTC AATCCGGCCG GATCGCTGTG GCACGGCTCG
GCCACGCTGA TGCTGGCCGC CGGCTCCGAC ATGAGCGCGG CGACGTTGCT GCCTGGCCGG
ATCGAATGGC GCACGGCGTT CTGGCCACTG TTTACCGGCC GCGTGCGCAT GATCATGCGG
CACAGCGAAG CGATGCCGGA GCCGATCACC GTCGACGCCA CGCCGCGCAC CGCGACTGTT
ACGTCCGGCT CGATCGCCGT GCCGGCTTCG CTGCTGAGCG GTCTTGGCGC GCCGTTTAAC
ACGCTCGATC TGCAAGGCAA TGTGCAGCTG TCCTGGTCCG ACTGGCGCAG CTTCAATCGG
GAGGCGTTCG GGCAACTGAC CATCATGTTG ACCGACGTCA GTTCGCGCGT CTCGCTGGTC
AAACCGCTTG GCTCCTACCG CGTGCTATTT CAGGCGCAGG GCGAGTCGTC CACGCTCGAC
CTGACCACCA TCAAGGGTCC GTTGATGCTG ACCGGCAATG GCACGGTGTC GGCGGCATCG
ACGTCGTTTC ATGGGACGGC CAGCGCCGCG CCTGAGGCCC GCGATAACCT CGCAGGATTG
CTGAACCTGT TGGGGCGGCC GAGCGGGCCG GACACGGTGG CGTTGACGTT CGTGCACTGA
 
Protein sequence
MNYWMRRLRV ALPWLVVAVL SAAAVMLTML PAAWITPQFA KKTGGHVNLV NPAGSLWHGS 
ATLMLAAGSD MSAATLLPGR IEWRTAFWPL FTGRVRMIMR HSEAMPEPIT VDATPRTATV
TSGSIAVPAS LLSGLGAPFN TLDLQGNVQL SWSDWRSFNR EAFGQLTIML TDVSSRVSLV
KPLGSYRVLF QAQGESSTLD LTTIKGPLML TGNGTVSAAS TSFHGTASAA PEARDNLAGL
LNLLGRPSGP DTVALTFVH