| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3943 |
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| Symbol | |
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| ID | 6281211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4416811 |
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| End bp | 4417497 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623530 |
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| Product | putative general secretory pathway protein J |
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| Protein accession | YP_001897554 |
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| Protein GI | 187925912 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.173018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA CCGTTCGCTC TGAGCGCCGG CGCCGATTGG GCGTGAGGGG CGCGCGTGGT
TTCACGCTGA TCGAATTGCT GGTCGCGATT GCGATTCTGG CGGTGATTGC CGTGCTGTCG
TGGCGCGGGC TCGACCAGAT CATTCGCGGC CGGCAGACCA TCACGAGCGC GATGGAGGAC
GAGCGCGTGT TTGCGCAGTT GTTCGACCAG ATGCGGATTG ATGCGCGGCA GGCCGCGTCG
GATGATGAGG CTGGGCAGGC GGCGGTGTCG GTGTCCGGCA GCGTGTTGCA GATCGTGCGG
GAATTCCGCT TGCCGGGTGC GGCGCCGCGG TTGCAGGTGG TGAGGTATCG GGTGTCCGAT
GGACGCGTGA TCCGGTATGC GTCGCCGCCT TTGGCGAATA TCGGAGAGTT GAGGGGGGCG
CTGCGCGGTA GTGAAGGTGA AGGGTGGAGC GGTGTGCCGT TGATGGGCGG TGTTGGGTCT
ATTTCTGCTC AGGTTTATGT GCCCAAGGTG GGGTGGACTA CGCAGATGGG AGAGGTGCAG
AGTGCCATTA CGGAGGCGGA CAATAATCTT AAGGTGCCCC AGTTGGGGAG TGCGCCGCTG
CCGCGGTCTG TGACTGGGTT GCAGGTGAGT GTTGGGGCTA AGTCGTTGGC GCGGCCTGTT
ACTCGGGTTT TTCTCGTCGG AGAGTGA
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| Protein sequence | MKTTVRSERR RRLGVRGARG FTLIELLVAI AILAVIAVLS WRGLDQIIRG RQTITSAMED
ERVFAQLFDQ MRIDARQAAS DDEAGQAAVS VSGSVLQIVR EFRLPGAAPR LQVVRYRVSD
GRVIRYASPP LANIGELRGA LRGSEGEGWS GVPLMGGVGS ISAQVYVPKV GWTTQMGEVQ
SAITEADNNL KVPQLGSAPL PRSVTGLQVS VGAKSLARPV TRVFLVGE
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