| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3942 |
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| Symbol | |
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| ID | 6281210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4416417 |
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| End bp | 4416833 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623529 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_001897553 |
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| Protein GI | 187925911 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.168829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCGTT GCAGGAGCAT GACGGCTCGC GAAAAGGTTC ACGGCGCGCA GCGCGGTTTT
ACGATGATCG AAGTGCTGGT GGCGCTGGCG ATCATCGCCA TCGCGTTGGC CGCTTCGTTG
CGCGCGGTGG GCAGTCTCGC GAGCGGCGAG GCCGATCTGC ACCGCCGCTT GCTGGCCGGC
TGGAGCGCGG ACAATACCTT GGCGCAGTTG CATCTGACGC ATGCCTGGCC GAACGTCGGC
TCGACGAGTT TCGACTGTTC GCAGGGCAAC TTGCAGTTGA TCTGTACCGA GCAGGTGACG
GCCACGCCGA ATCCGGTGTT TCGTCGAGTG GAAGTCATGG TGACGATGCC GGGCGGGTCC
GGCAATCTGG CTCAGATGGT GACGGTGGTC GCGAATGAAA ACAACCGTTC GCTCTGA
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| Protein sequence | MRRCRSMTAR EKVHGAQRGF TMIEVLVALA IIAIALAASL RAVGSLASGE ADLHRRLLAG
WSADNTLAQL HLTHAWPNVG STSFDCSQGN LQLICTEQVT ATPNPVFRRV EVMVTMPGGS
GNLAQMVTVV ANENNRSL
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