Gene Bphyt_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3942 
Symbol 
ID6281210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4416417 
End bp4416833 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID642623529 
Productgeneral secretion pathway protein I 
Protein accessionYP_001897553 
Protein GI187925911 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.168829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTT GCAGGAGCAT GACGGCTCGC GAAAAGGTTC ACGGCGCGCA GCGCGGTTTT 
ACGATGATCG AAGTGCTGGT GGCGCTGGCG ATCATCGCCA TCGCGTTGGC CGCTTCGTTG
CGCGCGGTGG GCAGTCTCGC GAGCGGCGAG GCCGATCTGC ACCGCCGCTT GCTGGCCGGC
TGGAGCGCGG ACAATACCTT GGCGCAGTTG CATCTGACGC ATGCCTGGCC GAACGTCGGC
TCGACGAGTT TCGACTGTTC GCAGGGCAAC TTGCAGTTGA TCTGTACCGA GCAGGTGACG
GCCACGCCGA ATCCGGTGTT TCGTCGAGTG GAAGTCATGG TGACGATGCC GGGCGGGTCC
GGCAATCTGG CTCAGATGGT GACGGTGGTC GCGAATGAAA ACAACCGTTC GCTCTGA
 
Protein sequence
MRRCRSMTAR EKVHGAQRGF TMIEVLVALA IIAIALAASL RAVGSLASGE ADLHRRLLAG 
WSADNTLAQL HLTHAWPNVG STSFDCSQGN LQLICTEQVT ATPNPVFRRV EVMVTMPGGS
GNLAQMVTVV ANENNRSL