Gene Bphyt_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3939 
Symbol 
ID6281207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4414676 
End bp4415098 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID642623526 
Productputative general secretory pathway protein C 
Protein accessionYP_001897550 
Protein GI187925908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0862174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA TGAACGCCAT CCAAATCCGC CTTCTGTCGC TCGCGCTGTT CGCCGTGTTC 
TGCGCGACGC TCACCTACTG GGTCATCACG ATCAGCACGT TGTCCAGTGC GCCGTTGCCC
GCCGCCGCCG CGCACGCGCA GATCTCGACC GAGCAGGCTG CCACGCTATT CGGCGGCCAA
CTCACGCGCA ACGCCAACCA GGACGTGCGG CTGTTCGGCA TCCTCTCTTT GCGGGAAGGC
GCCGCGGCCA TCGTCAGCGT GGGCGGTGAA CCGCCGCATG CGGTGTCGCT CGGCAGCGCG
CTGATGCAAG GCACCAAACT CTCCGAAGTC CGCGCCCGCT CGATCATCAT CGACCGCAAT
GGCGCGCATT CCGAAGTGTT CCTGCCAGCC AATCCCGCAG GTCCGACGAT CTACGTGCGC
TGA
 
Protein sequence
MMRMNAIQIR LLSLALFAVF CATLTYWVIT ISTLSSAPLP AAAAHAQIST EQAATLFGGQ 
LTRNANQDVR LFGILSLREG AAAIVSVGGE PPHAVSLGSA LMQGTKLSEV RARSIIIDRN
GAHSEVFLPA NPAGPTIYVR