| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3937 |
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| Symbol | |
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| ID | 6282047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4411891 |
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| End bp | 4413378 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623524 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001897548 |
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| Protein GI | 187925906 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.279584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCG CCGGCGCGAC GGAGCACGGC GGCCGCGAGG CGCCGTCAGC CATCGCCGCG
CGGCTCGTGC CGTACGGCTT CGCCCGTGCC GGCCAGATTC TGGTCGCGCA TCAGCATGCG
GACAGCCTCG AGGTCTGGAT CAGCGAACGC ACGAGCGACG CCGCGCTGTC CGAAGTAGCA
CGCAACTTCG GCGCAGTGTC GATCGTACGT CTGCCCGCCG ATGAGCTCAC GCAGGCGATC
AACCAGGCGT ATGCGCGCCA GGACGGCAGC GCTGCGCAGG TGGTCGGCGA AGTGGAAGGC
GAAGTCGATC TCTCGCGCTT GATGCAGGAC ATTCCCGAGG TGGAGGATCT GCTGGAGTCG
GAAGACGACG CCCCGATCAT CCGCATGATC AACGCGCTGC TTACGCAAGC GGCGCGCGAG
CAGGCGTCGG ATATTCATAT CGAGCCGTTC GAGACTTCTT CCGTGGTGCG CTTTCGCGTC
GACGGCACGT TGCGCGACGT CGTGCGGCCG AAGAAAGCGT TGCACGGTGC GCTGATTTCG
CGCATCAAGA TCATGGCGCA GCTCGATATC GCCGAGAAGC GTTTGCCGCA AGACGGCCGT
ATCACACTGC GCGTGGGCGG CCGCCCGGTC GATGTGCGCG TCTCGACGCT GCCGACCGGT
CACGGCGAAC GCGCGGTGCT GCGTCTGCTG GAAAAAGACG CGTCGCGCCT GAACCTCGAA
GCGCTCGGCA TGGCGTCGGA TACGCTCGGT AAGTTCGACA AGCTGATCGG CAGGCCGCAC
GGCATCGTGC TCGTGACCGG GCCGACGGGC TCCGGTAAAA CGACCACGCT GTATGCGGCC
ATGTCGCGGC TCGAAACCGC GACCACGAAC ATCATGACGG TCGAGGATCC GATCGAATAC
GACCTGTCGG GCATCGGCCA GACGCAGGTC AACGAACGGA TCGGCATGAC CTTCGCGCGG
GCGCTTCGCT CGATTCTGCG GCAGGATCCG GACGTCATCA TGATCGGTGA AATCCGCGAC
CTCGAGACCG CGCAGATCGC GGTGCAGGCG TCGTTGACAG GTCACCTCGT GCTGGCCACG
CTGCACACCA ACGATGCGGC ATCCGCCGTT ACGCGTTTGA CCGACATGGG CGTCGAGCCG
TATCTGCTGG CGTCGTCGCT GCTCGGCGTG CTGGCGCAGC GGCTGGTGCG GCGCCTGTGC
CCGATATGCC GCGAAGAGCG TGTCGAGGAA GACGGCAGCG TGCGTTACCA TCCGGTCGGT
TGCGACCGGT GCGGCCATTC CGGCTATGCG GGACGCCGCG GCGTCTACGA ACTGCTGCTG
ATCGACGACG ACATCCGCAC GCTAGTCCAC CGCAATGCAG CCGATGCCGA AATTCTCGCG
GCCGGCCGTG CGCAAGGCAT GCGTACGCTG CGCGAGGATG CGGACCGCTG GCTCGCCTCC
GGGCTGACAT CGCTCGAAGA AGTGATCCGC GTCACGGGCG GAGCTTAA
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| Protein sequence | MSPAGATEHG GREAPSAIAA RLVPYGFARA GQILVAHQHA DSLEVWISER TSDAALSEVA
RNFGAVSIVR LPADELTQAI NQAYARQDGS AAQVVGEVEG EVDLSRLMQD IPEVEDLLES
EDDAPIIRMI NALLTQAARE QASDIHIEPF ETSSVVRFRV DGTLRDVVRP KKALHGALIS
RIKIMAQLDI AEKRLPQDGR ITLRVGGRPV DVRVSTLPTG HGERAVLRLL EKDASRLNLE
ALGMASDTLG KFDKLIGRPH GIVLVTGPTG SGKTTTLYAA MSRLETATTN IMTVEDPIEY
DLSGIGQTQV NERIGMTFAR ALRSILRQDP DVIMIGEIRD LETAQIAVQA SLTGHLVLAT
LHTNDAASAV TRLTDMGVEP YLLASSLLGV LAQRLVRRLC PICREERVEE DGSVRYHPVG
CDRCGHSGYA GRRGVYELLL IDDDIRTLVH RNAADAEILA AGRAQGMRTL REDADRWLAS
GLTSLEEVIR VTGGA
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