| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3931 |
|---|
| Symbol | |
|---|
| ID | 6280886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4402099 |
|---|
| End bp | 4403301 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642623518 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001897542 |
|---|
| Protein GI | 187925900 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.393426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGG CGTTTTCATT TTTTCCAGCC TGGCCGCTTT CACCCGACGC CATTTTTTGG
GCTGGTCTCG CATTGCTCGC TGCCGGCTTG TGCGGCGAGC TGTGCTACCG CGCGTGGCGT
TTACCGCGCA TTTCCGGCTA TGCGGTTATT GGCCTGATCG CCGGTGCGGC CGGTTCCGGC
GTGATCGACG CGGATTCCGC GAGCGCCGCG CGGCCGCTGC TCGATGTCGC GCTCGGTTTG
CTGCTGTTCG AACTCGGCAG CCGGCTCGAT TTGCGCTGGA TTCGTCGCAA TCCTTGGTTG
ATTTTGTCGA GCGTCGCCGA AGCTACGCTG ACTTTCGCTC TCGTGTTGCC GGTCCTGCTG
TTCCTGAACG TGCCGCTGAT GGTGGCAACG GTGCTCGCCG CAATCGCCAT GGCGACGTCG
CCGGCCATGG TGATTCAGCT GAAAACCGAA TTGCGCGCGG AAGGGCAGGT CACCCAGCGT
CTGTTGACTT TGACCGCGCT GAACAGCATG TATGCCGTGG TGATCGAAAA GCTCGTGTCG
AGCTGGCTGC ATCAGGAGAT GTACGGCAAC GTATTCGCGA CCATCCTGCA ACCGCTTTAT
CTGCTGGTCG GCTCGCTGGT GCTCGCGTAT CTGCTCGCAC GTACCTGCAC ATTCTTTTAT
CGACGTTTGA ACATGCAGGA CGAGCACTCG TTCGTCGCGC TGTTCGGCCT CGTGCTGCTG
GCCATCGCGA TTGCGCATCT GTTCAAGCTG TCGACCATTC TTGCGCTGCT GGCCGCGGGC
ATCATCGTGA AGAATCATGA AGCACGTCCG CAGTTATGGC CGGAGCACTT CGGCACGGCC
GGCTGGTTGT TGACCGTGAT TCTGTTCGTG CTGACGTTGA CCTCGTTCGA ATGGAAAGAC
ATCGCGCTCG GCGGCGTCGC GGCTCTGGGT CTGATTGTTG CGCGCCTTGT GGCGAAGCTG
GTTGGTGTGC TGGCGTTCGC CAAGCCGAGC GGCTTGAACT GGAAGCAGGG GATGGCGCTC
GGTCTGTCCT TATCGCCCAT GTCGGCGCTC GCGTATCTGC TCGTCGACGA CACCTACAAC
CTGTATCCGA ACTTCGACCC GCAACTGCGC GCGATCGTGA TGTGTTCTAT TTTCGTGCTG
CAGATTCTCG GGCCGTGGCT CGTCTATCGC AGCCTGGCGC TGGTCGCTGA GCGGCGCGAA
TAG
|
|---|
| Protein sequence | MNSAFSFFPA WPLSPDAIFW AGLALLAAGL CGELCYRAWR LPRISGYAVI GLIAGAAGSG
VIDADSASAA RPLLDVALGL LLFELGSRLD LRWIRRNPWL ILSSVAEATL TFALVLPVLL
FLNVPLMVAT VLAAIAMATS PAMVIQLKTE LRAEGQVTQR LLTLTALNSM YAVVIEKLVS
SWLHQEMYGN VFATILQPLY LLVGSLVLAY LLARTCTFFY RRLNMQDEHS FVALFGLVLL
AIAIAHLFKL STILALLAAG IIVKNHEARP QLWPEHFGTA GWLLTVILFV LTLTSFEWKD
IALGGVAALG LIVARLVAKL VGVLAFAKPS GLNWKQGMAL GLSLSPMSAL AYLLVDDTYN
LYPNFDPQLR AIVMCSIFVL QILGPWLVYR SLALVAERRE
|
|---|
| |