| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3924 |
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| Symbol | |
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| ID | 6284082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4394505 |
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| End bp | 4395191 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623511 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001897535 |
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| Protein GI | 187925893 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.154255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCC TTCTGATCGA AGATGACCGC CCCATCGCAC GCGGCATCCA AAGCAGTCTC
GAACAAGCCG GCTTCACCGT CGACATGGTC CACGACGGCA TTTTCGCCGA GCAGGCCCTC
ACGCAAAATC GCCATGAGCT GGTGATCCTC GATCTGGGTC TGCCCGGCAT CGACGGCATG
ACGCTGCTCT CGCGCTTCCG TCAGAGCAAT CGTCACACGC CGGTGATCAT CCTCACCGCG
CGCGACGAGC TGAACGACCG CGTGCAAGGC CTGAATTCCG GCGCCGACGA CTACATGCTG
AAGCCGTTCG AGCCCACCGA ACTCGAAGCG CGCATCCGTG CGGTGATGCG CCGCAGCGGT
CCGCACGGCG ACATGCCGCG TCCGGAAGTG TCGCTGGGCG GTGTGCGCCT GTCGGGCGTC
GATCGCCGCA TTTTCAACGA CGACAAGCCG CTCGAACTCT CGCCGCGTGA ATTCGCGGTG
CTCGAAATGC TGCTGCTGCG TCATGGCCGC GTGGTCAGCA AGGCGCAACT GCAAGACCAT
CTGACGCATT TCGGCGGCGA TCTCGGCGAC ACCGCGATCG AGGTCTACGT GCACCGGGTG
CGTAAAAAGC TCGAAAGCTG CCGTGTCGAG ATCGTCACGG TGCGCGGCTT CGGTTATCTG
TTGCAGGAAA TCCGTCAGGC CGCATAA
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| Protein sequence | MRLLLIEDDR PIARGIQSSL EQAGFTVDMV HDGIFAEQAL TQNRHELVIL DLGLPGIDGM
TLLSRFRQSN RHTPVIILTA RDELNDRVQG LNSGADDYML KPFEPTELEA RIRAVMRRSG
PHGDMPRPEV SLGGVRLSGV DRRIFNDDKP LELSPREFAV LEMLLLRHGR VVSKAQLQDH
LTHFGGDLGD TAIEVYVHRV RKKLESCRVE IVTVRGFGYL LQEIRQAA
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