Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3920 |
Symbol | |
ID | 6284078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4392021 |
End bp | 4392512 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642623507 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_001897531 |
Protein GI | 187925889 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.31326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGAAC TGGATCACTT CGATCTCGCG CTGCTGGACG TGCTTCAACG CTTCGGCCGT GCAACGCATC AGCAATTAGC GGAACAGGTT CCGCTGTCGC CGTCGCAGAT CGGACGGCGT TTGCAGCGGC TGGAACAGGT GGGGGTGGTG GACGGCTATC GCGTCGTGCT CCGGCCGGAA AAACTCGGAC TCGGCGTCAC CGCGTTTACC AGTCTGAAAT TGAAGCACCA CGGCGATTCG ATCATCGAGC AGTTTCAGCA GCAGATCGAT GTGCTGCCTG AAGTGCTGGA ATGTCATGCC GTGGTGGGCG ACGCCGACTA TCTGTTGCGC ATCGTCGCGC CCGATCTGAA TTATCTGTCG ACGTTCGTGA TGAAGAAGCT GATGCGTGTG CCGGGCGTCG ACAGCGTACG CTCGAATATC GTGCTCACCA CGTTCAAGCG CAACGGCCCG TTGCCGCTGG GGCATCTGTC GCCAGGAACA GCCGCACCTT GA
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Protein sequence | MLELDHFDLA LLDVLQRFGR ATHQQLAEQV PLSPSQIGRR LQRLEQVGVV DGYRVVLRPE KLGLGVTAFT SLKLKHHGDS IIEQFQQQID VLPEVLECHA VVGDADYLLR IVAPDLNYLS TFVMKKLMRV PGVDSVRSNI VLTTFKRNGP LPLGHLSPGT AAP
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