Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3918 |
Symbol | |
ID | 6283327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4390216 |
End bp | 4391115 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642623505 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001897529 |
Protein GI | 187925887 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.369694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA CTCTGCTCCG GGCGTTCGTC ACCGTGGCTC GCGAGGGCAA CCTCACGCGT GCCGCCGTGC AACTGCACCT GACCCAACCT GCCGTCAGCC TGCAAATCAA GCATTTGCAG GAGACGCTCG GCGTCACGCT GTTCACGCGG ACCTCGCACG GGCTCTCGCT CACGCGCGAC GGACAAGCGC TGCTGCCTCA CGCCGAACGC GCGCTCGGCG CGGCGAACGA CGTGCAGCGG GCGGCGCAAT CGCTGCGTCA CGAAGTACGT GGACGACTGC GGATCGGCAC CATCCTCGAC CCGGCGTTTC TGCGCCTGGG CGGCTTTCTC AAACAGCTCG TGGAAAGCTG GCCGCACATC GAGACGGCTT TGCGCCACGG CATGTCGGGC TGGGTGCTGG AGCAGGTTCG CGCGGGCGAA CTGGATGTCG GCTACTACAT CGGCTTGCCG TCCGAAGACG AACCGCGCGA CGGCCCAGCT TTTTACGCGC TCACGCTGAC TCACTTCCAG TACCGCGTGC TCGCGCCGGC CGGCTGGAAA GACCGCGTGA AGGGCGCGCG CGACTGGCGT TCGCTCGCGG CGCTGCCGTG GATCTGGACG CCGCCCGCGT CGGCACATAA CCGGCTGTTG ACGCGCTGCT TCGACGAAGC CGGTGTGAAG CCGGTCAAGG TGGCGGAAGT GGACCAGGAG CCATCGATGC TCGATCTGGT CAAATCGGGC GTCGGTCTCA CGCTCGCGCG CGACGCCACC GCGATCGCAG AAGCGCATGC GCATGCGTTG ACCATCGTCG AAGGTGTTAC CGTGCCGACT CAGCTCAGCT TTATCACGCT CGCGCAGCGC AAGGAGGAAC CGGCGATTGC CGCGGCGTTG AAGCTGATCG AACAGCAGTG GGCGACTTGA
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Protein sequence | MDLTLLRAFV TVAREGNLTR AAVQLHLTQP AVSLQIKHLQ ETLGVTLFTR TSHGLSLTRD GQALLPHAER ALGAANDVQR AAQSLRHEVR GRLRIGTILD PAFLRLGGFL KQLVESWPHI ETALRHGMSG WVLEQVRAGE LDVGYYIGLP SEDEPRDGPA FYALTLTHFQ YRVLAPAGWK DRVKGARDWR SLAALPWIWT PPASAHNRLL TRCFDEAGVK PVKVAEVDQE PSMLDLVKSG VGLTLARDAT AIAEAHAHAL TIVEGVTVPT QLSFITLAQR KEEPAIAAAL KLIEQQWAT
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