Gene Bphyt_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3918 
Symbol 
ID6283327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4390216 
End bp4391115 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID642623505 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001897529 
Protein GI187925887 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.369694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA CTCTGCTCCG GGCGTTCGTC ACCGTGGCTC GCGAGGGCAA CCTCACGCGT 
GCCGCCGTGC AACTGCACCT GACCCAACCT GCCGTCAGCC TGCAAATCAA GCATTTGCAG
GAGACGCTCG GCGTCACGCT GTTCACGCGG ACCTCGCACG GGCTCTCGCT CACGCGCGAC
GGACAAGCGC TGCTGCCTCA CGCCGAACGC GCGCTCGGCG CGGCGAACGA CGTGCAGCGG
GCGGCGCAAT CGCTGCGTCA CGAAGTACGT GGACGACTGC GGATCGGCAC CATCCTCGAC
CCGGCGTTTC TGCGCCTGGG CGGCTTTCTC AAACAGCTCG TGGAAAGCTG GCCGCACATC
GAGACGGCTT TGCGCCACGG CATGTCGGGC TGGGTGCTGG AGCAGGTTCG CGCGGGCGAA
CTGGATGTCG GCTACTACAT CGGCTTGCCG TCCGAAGACG AACCGCGCGA CGGCCCAGCT
TTTTACGCGC TCACGCTGAC TCACTTCCAG TACCGCGTGC TCGCGCCGGC CGGCTGGAAA
GACCGCGTGA AGGGCGCGCG CGACTGGCGT TCGCTCGCGG CGCTGCCGTG GATCTGGACG
CCGCCCGCGT CGGCACATAA CCGGCTGTTG ACGCGCTGCT TCGACGAAGC CGGTGTGAAG
CCGGTCAAGG TGGCGGAAGT GGACCAGGAG CCATCGATGC TCGATCTGGT CAAATCGGGC
GTCGGTCTCA CGCTCGCGCG CGACGCCACC GCGATCGCAG AAGCGCATGC GCATGCGTTG
ACCATCGTCG AAGGTGTTAC CGTGCCGACT CAGCTCAGCT TTATCACGCT CGCGCAGCGC
AAGGAGGAAC CGGCGATTGC CGCGGCGTTG AAGCTGATCG AACAGCAGTG GGCGACTTGA
 
Protein sequence
MDLTLLRAFV TVAREGNLTR AAVQLHLTQP AVSLQIKHLQ ETLGVTLFTR TSHGLSLTRD 
GQALLPHAER ALGAANDVQR AAQSLRHEVR GRLRIGTILD PAFLRLGGFL KQLVESWPHI
ETALRHGMSG WVLEQVRAGE LDVGYYIGLP SEDEPRDGPA FYALTLTHFQ YRVLAPAGWK
DRVKGARDWR SLAALPWIWT PPASAHNRLL TRCFDEAGVK PVKVAEVDQE PSMLDLVKSG
VGLTLARDAT AIAEAHAHAL TIVEGVTVPT QLSFITLAQR KEEPAIAAAL KLIEQQWAT