| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3916 |
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| Symbol | |
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| ID | 6283325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4386681 |
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| End bp | 4388393 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623503 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001897527 |
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| Protein GI | 187925885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATA CCGACACGAC GCACGCAACC CGGCGCCTCG AAGGCGAATT CGACTACATC
ATCGTGGGCG CGGGGACAGC GGGTTGTGTG CTGGCCAATC GCCTGACCCA GGATCCCGAC
GTGCAGGTAT TGCTGCTTGA AGCCGGCGGC AAGGACGACT ACCACTGGAT TCACGTGCCG
GTCGGCTACC TCTATTGCAT CGGCAATCCG CGCACGGACT GGCTCTATAA AACGCAGGCG
GAAGCGGGCC TCAATGGCCG CGCGCTGTCG TATCCGCGTG GACGCGTTTT GGGCGGCAGT
TCTTCCATCA ACGGCATGAT CTACATGCGC GGTCAGCGCG AAGATTACGA TGAATGGGCG
CGCGTCACGA ACGACGCATC CTGGTCATGG AACTCAGTGT TGCCGGTCTT CAAACGCAGC
GAAGATCACC ATGCCGGCGC CAGCGAATCG CACGGCGCGG GCGGACCATG GCGAGTCGAA
AAACAGCGGT TGAAATGGAA AATTCTCGAA GAGTTTTCAC GCGCCGCGCA AGAGACCGGC
ATTCCCGCCA CCGACGATTT CAACCGCGGC GACAACACCG GTGTCGGCTA TTTCGACGTG
AATCAGAAAC GCGGCATTCG CTGGAACGCA TCGAAGGCGT TTTTGCGTCC CGCACTCAAG
CGGCCGAATC TCACCGTGAT CACCGGCGCG TACACGCAAC GCGTCGTGTT CGAAGGGCGC
CGTTGCACAG GCGTCGAATA TCGCGGCGAC AACACGGACT ATCTGGCCAA GGCGCGTTGC
GAAGTGATCC TCAGTTCAGG CGCGGTGAAT TCACCGCAAT TGCTGGAACT CTCCGGCATC
GGCAATGGCG CGCGTCTGCA GAATCTGGGT ATCGAGGTCG TCGACGATCT GCGTGGCGTG
GGCGAGAATC TGCAGGATCA TTTGCAGTTG CGCATGGCCT ATAAAGTCGA CGGCGTGCGC
ACGCTCAATA CAGCGTCCGC GCATTGGTGG GGCAAGTTGC TGATCGGCAT GCAGTACGCG
TTTTTTCAAA GCGGCCCGAT GTCGATGTCG CCGTCGCAAC TTGGCGCGTT CGCCAAATCC
GATCCGGGCG ATCGCTCGCT CACGCGGCCC GACCTCGAAT ATCACGTCCA GCCGCTTTCG
CTCGATCGCT TCGGCGAACC GCTGCATCGG TTCAATGCGT TCACGGCGTC GGTGTGCCAG
TTGCGGCCCA CTTCGCGCGG CAGCATTCAC ATCGAATCCG CTGATGCTTC AGCGCCGCCC
TTGATCGCAC CGAACTATCT CTCCACCGAC TACGACCGGC ACGTTGCCGC CAACGCGCTG
CGTCTCACGC GCCGCATCGC GGCGGCGCCC GCGCTCGCAC GTTACCGGCC GCAGGAGATT
TTGCCGGGCA TTCAGTACCA GACCGAAGAG GAGTTGCAGC AAGCTGCCGG CGCGGTCGGC
ACGACCATCT TCCATCCAGT CGGCACCTGC CGCATGGGGA CGACCGACGA CCCCGGCGCC
GTCGTCGACA ACCGGCTACG GGTTATCGGT GTTGACGGAC TGCGCGTGGT CGATGCATCT
GTCATGCCGA CCATCACCTC GGGCAATACC AATTCGCCCA CGCTGATGAT CGCCGAGCGC
GCCAGCGACA TGATCCGTGA AGATCGCCGT GCGCGTGTGG GCGGCAGCTT CGCGGCACAA
ACTTGCGCGA CGCGGTCCAT GTCCGCGGTG TGA
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| Protein sequence | MSYTDTTHAT RRLEGEFDYI IVGAGTAGCV LANRLTQDPD VQVLLLEAGG KDDYHWIHVP
VGYLYCIGNP RTDWLYKTQA EAGLNGRALS YPRGRVLGGS SSINGMIYMR GQREDYDEWA
RVTNDASWSW NSVLPVFKRS EDHHAGASES HGAGGPWRVE KQRLKWKILE EFSRAAQETG
IPATDDFNRG DNTGVGYFDV NQKRGIRWNA SKAFLRPALK RPNLTVITGA YTQRVVFEGR
RCTGVEYRGD NTDYLAKARC EVILSSGAVN SPQLLELSGI GNGARLQNLG IEVVDDLRGV
GENLQDHLQL RMAYKVDGVR TLNTASAHWW GKLLIGMQYA FFQSGPMSMS PSQLGAFAKS
DPGDRSLTRP DLEYHVQPLS LDRFGEPLHR FNAFTASVCQ LRPTSRGSIH IESADASAPP
LIAPNYLSTD YDRHVAANAL RLTRRIAAAP ALARYRPQEI LPGIQYQTEE ELQQAAGAVG
TTIFHPVGTC RMGTTDDPGA VVDNRLRVIG VDGLRVVDAS VMPTITSGNT NSPTLMIAER
ASDMIREDRR ARVGGSFAAQ TCATRSMSAV
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