| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3911 |
|---|
| Symbol | |
|---|
| ID | 6284711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4381538 |
|---|
| End bp | 4382509 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642623498 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001897522 |
|---|
| Protein GI | 187925880 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.658147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAA AAGTGCTCTA CGGTCTGCTG CTGATCGTGC TTCTCGCGGT GCCCGTGCTC
GGCATCTATC CGCTCTTCGT GATGAAGGTG TTGTGCTTCG CGCTGTTCGC GGCGGCGTTT
AATCTGCTGA TCGGCTACAC CGGTTTGCTG TCGTTCGGCC ACGCCATGTT TCTGGCTTCG
GCTGGCTATG TGACGGGCTA TGCGATCCAA TCGCTCGGCT TCTCGCCGGA GCTCGGCGTG
CTGGCCGGCA CCGCTGCGGC AACCTTGCTT GGGCTGATCG TGGGTATCTT CGCGATTCGC
CGCCAGGGCA TCTACTTCGC AATGGTCACG CTGGCGCTCG CGCAGATGGT GTACTTCGTG
TTCCTGCAGG CGCCGTTCAC ACATGGCGAG GACGGTCTGC AAGGCGTGCC GCGCGGCAAA
CTGTTCGGCG TGCTGGATCT GTCGTCCGAC GTGGCGCTGT ATTTCGTCGT GCTCGCCGTG
ATGGTGCTGG CCTTCCTGCT GATTGTGCGG ATCGTGCATT CGCCGTTCGG GCAGGTGCTG
GTGGCCATCA AGGAGAACGA GCCGCGCGCG GTGTCGCTTG GCTACGATAC GGATCGCTTC
AAGCTGCTCG CGTTCATTCT GTCGGCGGGG ATTGCGGGTC TGGCGGGTTC GCTCAAGGTG
TTGGTGCAAG GCTTCGAGAC GTTGAGCGAC GCATATTGGA CCATGTCCGG CCTCGTGATC
CTGATGACGC TCGTCGGCGG CATGGGTACG TTGTTTGGAC CGCTGCTTGG CGCGGCGCTG
ATCGTTGCGC TCGAGGACCG GCTCGGCGAT ATCGGCGGGG CGTTGGCGAC GACCACCGGT
GTCGAGTGGT TCCGCTCGCT GGGCGAATCG GTCACCATCG TCACCGGCGT GATTTTCATT
GCCTGCGTGC TGGCGTTCCG GCGTGGCATT GTCGGTGAAA TCGTCGCGCG AGTGCGGCCG
CTGCGAGCCT GA
|
|---|
| Protein sequence | MQRKVLYGLL LIVLLAVPVL GIYPLFVMKV LCFALFAAAF NLLIGYTGLL SFGHAMFLAS
AGYVTGYAIQ SLGFSPELGV LAGTAAATLL GLIVGIFAIR RQGIYFAMVT LALAQMVYFV
FLQAPFTHGE DGLQGVPRGK LFGVLDLSSD VALYFVVLAV MVLAFLLIVR IVHSPFGQVL
VAIKENEPRA VSLGYDTDRF KLLAFILSAG IAGLAGSLKV LVQGFETLSD AYWTMSGLVI
LMTLVGGMGT LFGPLLGAAL IVALEDRLGD IGGALATTTG VEWFRSLGES VTIVTGVIFI
ACVLAFRRGI VGEIVARVRP LRA
|
|---|
| |