Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3909 |
Symbol | |
ID | 6284709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4378322 |
End bp | 4379482 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623496 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001897520 |
Protein GI | 187925878 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CAAAGCAGTG GGTTCGCACC GGCATTGCCA TGGCGTTGAT GTGCAGTGCG GGCGCGGCGT TCGCTCAGGT GAAGATCGGC GTGACGCTTT CTACTACGGG GCCGGCCGCA TCGCTCGGGA TTCCTGAAAA GAATACGATT GCGCTGCTGC CGAAAGAGAT CGGCGGCAAG ACCGTGCAGT ACATCATTCT CGACGACGCA TCCGATACCG GCAAAGCCGT GCAGAACACG CGCAAGCTGA TCGACGAAGA CCACGTCGAC GCGATCATCG GTTCGACCGT TACGCCGAAT TCGCTCGCCA TGCTCGACGC CGCTGCCGAA GGCAAGACGC CGGTGATCTC GCTGGCGGCA TCGGCGGCGA TCATTTCGCC GATGGACGCG AAGCGCGCAT GGGCCTTCAA ACCGCCGCAA AACGACAGCC TGATGGCCGA CGCCATCGCC GATTACATGG AGCATCACGG CGTGAAAACG GTGGGCTTCA TCGGCTTCGC GGATGCCTAC GGCGACGGCT GGAACAACGT CTTCACCGCG GCGGCCGCGG CACACAATCT GAAGATCGTC TCGAACGAGC GCTTTAACCG CACCGATGCA TCGGTGACGG GTCAGGTGCT GAAGACGATG GGCGCGAATC CCGACGCGGT GCTGATCGCG GGCGCGGGCA CGCCGTCGGC GCTGCCGGCC AAGACGCTCA AGGAGCGCGG CTACAAGGGC AAGGTCTATC AGACGCACGG CGTCGCCAAC AACGACTTCC TGCGCGTGTG CGGCAAAGAT TGCGAAGGCG AATTCCTGCC GGCTGGCCCG ATCCTCGTGG CGGATCAACT GCCTGACTCG AACCCGGTGA AGAAGTCGTC GCTGGCCTAT AAAGCGGCTT ACGAGAAAAC ATATGGCGCG GGCTCGGTTG CGACCTTCGG CGGTCACGCA TGGGACGCCG GCCAAATGCT GCAAGCAGCG ATTCCGGTCG CGCTGAAGAC CGCTCAGCCG GGCACGGAAC AGTTCCGCGT GGCACTGCGT GGCGCGCTCG AGAACATCAA GGAACTGCCG GTTTCGCACG GCATCATGAA CACCACCCCG ACCGACCACA ACGGCCTCGA CAAGCGCGCA CGCGTGATCG TGCAGATCGT CGACGGCAAG TGGAAGCTGC AGAACGAGTA A
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Protein sequence | MKKTKQWVRT GIAMALMCSA GAAFAQVKIG VTLSTTGPAA SLGIPEKNTI ALLPKEIGGK TVQYIILDDA SDTGKAVQNT RKLIDEDHVD AIIGSTVTPN SLAMLDAAAE GKTPVISLAA SAAIISPMDA KRAWAFKPPQ NDSLMADAIA DYMEHHGVKT VGFIGFADAY GDGWNNVFTA AAAAHNLKIV SNERFNRTDA SVTGQVLKTM GANPDAVLIA GAGTPSALPA KTLKERGYKG KVYQTHGVAN NDFLRVCGKD CEGEFLPAGP ILVADQLPDS NPVKKSSLAY KAAYEKTYGA GSVATFGGHA WDAGQMLQAA IPVALKTAQP GTEQFRVALR GALENIKELP VSHGIMNTTP TDHNGLDKRA RVIVQIVDGK WKLQNE
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