| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3907 |
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| Symbol | |
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| ID | 6284707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4375273 |
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| End bp | 4377057 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623494 |
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| Product | ABC transporter related |
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| Protein accession | YP_001897518 |
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| Protein GI | 187925876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA TCATGCAAAA CAAGTTCTTC TGGTTGTTCC TTGTGGTGCT GTTCGCGCTG
CCGGTGTTGC CGCAACCGAT TCACGTGCCT GAGTACTGGG TGACGCTGCT CAACTACATC
GGCCTGTATT CGATCGTCGC GATCGGTCTT GTGCTGTTGA CCGGCATCGG CGGGATGACG
AGCTTCGGCC AGGCCGCGTT CGTTGGTATC GGCGCCTATG CAACCGCGTA TCTGACGACG
CGCTATGGCG TTTCGCCGTG GCTCGCGCTG ATTGCCGGCG TGGCGGTGAC GGCATTGATC
GCGCTCATGC TCGGACTGGT GACGATGCGT CTGTCAGGAC ACTTTCTGCC GCTCGGCACG
ATCGCATGGG GTCTCGCGCT GTTTTACCTG TTCGGCAATC TTGAAATGCT CGGCAAGTAC
GACGGCATCA ACGGGATTCC GGTGCTGAAT GTGTTCGGCA TCGACCTCGA ATCCGGCCGC
CATATCTATT ACCTGATCTG GCTGGTCGTG CTCGGTGCGG TGATTTCAGT TCAGAACCTG
CTTAATAGTC GTCCTGGGCG GGCGATCCGC GCGTTACGCG GCGGCGGCAT GATGGCCGAG
GCGATGGGCG TGAACACCGG GTGGATGCGC GTGGTGATCT TCGTGTACGC GGCGGTGCTG
GCCGCGGTCT CGGGGTTCCT CTACGCGCAC TTGCAGCGTG CGGTGAACCC GACGCCTTTC
GGTCTGAATC ACGGCATCGA GTTTCTGTTC ATGGCTGTTG TGGGCGGCGT TTCGCATGTC
TGGGGCGCGG TACTCGGCGC GGCGATCCTG ACGGTGCTGC AGGACTATCT GCAGACCTTG
CTGCCCAAGC TGCTCGGCGA GAACGGCAAC TTCGAAGTGA TCGTGTTCGG CATCTTGATG
GTGCTGTTGC TGCAGTACGC GCGCCAAGGC GTCTGGCCGT TCGTTGCGCG CTTTTTCCCG
AAAGGCCCGC GCGCACATCT GGCGGATCAT GCGGAGCCGT TGCCGCAGCG CAGCAAGCCA
GCGGCCGGCG AAGACTTGTT GACGGTGAAC AAGGCGCGCA AGCAGTTCGG CGGGCTGGTT
GCGGTGAACG ATGTCAGCTT CGAAGTGAAG GCGGGGCAGA TCATCGGTCT GATCGGGCCG
AATGGCGCCG GTAAGTCGAC CACCTTCAAT CTGGTCACCG GCGTGTTGCA GGCGACCAGT
GGTGAGATTA CTTTCTGCGG CGAGCGCATC GATTCGCTGA GTTCACGTGA AATCGTCAAA
CGGGGAATCG GCCGCACCTT CCAGCACGTC AAGCTGCTGC CGGGGATGAC AGTGCTTGAG
AACGTCGCGA TCGGCGCGCA CTTGCGCGGG CAGGCGGGCG TGTGGCGCAG CGTCGTGCGC
CTGAACAGCG CGGAAGAAGC ACGGTTGATG GCTGAGGCGG CTCGCCAGAT CCGCCGCGTC
GGGCTCGAGC AGCATATGTA CGACGAAGCT GGCAGCCTCG CGTTGGGGCA GCAGCGGATT
CTCGAAATCG CTCGCGCGTT GTGCTGTGAT CCGACGCTGC TGTTGCTGGA TGAACCGGCC
GCCGGCCTGC GCTATCAGGA AAAGCTGCAA CTGGCCGACC TGCTGCGGCG CCTGAAGGCC
GAAGGTATGA GCGTGCTGCT GGTGGAGCAC GATATGGATT TCGTGATGAA TCTCACCGAT
CGGCTGGTGG TCATGGAGTT CGGGACGCGT ATCGCCGAAG GTTTGCCGCA AGAGGTGCAG
CAAGATCCAG CAGTTTTGGA AGCGTATCTC GGCGGGGTGG AGTGA
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| Protein sequence | MKRIMQNKFF WLFLVVLFAL PVLPQPIHVP EYWVTLLNYI GLYSIVAIGL VLLTGIGGMT
SFGQAAFVGI GAYATAYLTT RYGVSPWLAL IAGVAVTALI ALMLGLVTMR LSGHFLPLGT
IAWGLALFYL FGNLEMLGKY DGINGIPVLN VFGIDLESGR HIYYLIWLVV LGAVISVQNL
LNSRPGRAIR ALRGGGMMAE AMGVNTGWMR VVIFVYAAVL AAVSGFLYAH LQRAVNPTPF
GLNHGIEFLF MAVVGGVSHV WGAVLGAAIL TVLQDYLQTL LPKLLGENGN FEVIVFGILM
VLLLQYARQG VWPFVARFFP KGPRAHLADH AEPLPQRSKP AAGEDLLTVN KARKQFGGLV
AVNDVSFEVK AGQIIGLIGP NGAGKSTTFN LVTGVLQATS GEITFCGERI DSLSSREIVK
RGIGRTFQHV KLLPGMTVLE NVAIGAHLRG QAGVWRSVVR LNSAEEARLM AEAARQIRRV
GLEQHMYDEA GSLALGQQRI LEIARALCCD PTLLLLDEPA AGLRYQEKLQ LADLLRRLKA
EGMSVLLVEH DMDFVMNLTD RLVVMEFGTR IAEGLPQEVQ QDPAVLEAYL GGVE
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