Gene Bphyt_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3906 
Symbol 
ID6284706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4374509 
End bp4375261 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID642623493 
ProductABC transporter related 
Protein accessionYP_001897517 
Protein GI187925875 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG CTAGCCCGAT TCTCGACGTC GACGGTTTGT CGGTCCGCTA TGGCAAGGTG 
GAAGCGCTGC ACGGTGCGGC GATCAAGGTG CGGCCCGGCC AGATCGTCTC CGTAATTGGC
CCGAACGGTG CGGGCAAGTC CACGCTGCTG AACGCGATCA TGGGCGCATT GCCGACGACG
GGCCACGCGA AGGGCGCCGT CCTGTATCAA GGTGAAGACG TCAGCGCCGT GCCGGTCGAA
AAGCGTGTCG CGCGCGGCAT GTGCCTGGTG CCGGAGAAGC GCGAACTGTT TGCGTCGATG
ACGGTGGAAG ACAATCTTGT CCTCGGCGCC TATCGGCGCA AGCGGGCGGG GGAGCGCAAC
TTCCTCGACC AGCTTGAGCC AGTCTTTACT CTGTTTCCGC GACTGAGGGA ACGGCGCAAG
CAGGCCGCCG GAACCTTGTC CGGTGGCGAA CGGCAGATGC TCGCAGTAGG CCGGGCGCTC
ATGGGCAAGC CGGATCTGCT GATGCTGGAC GAGCCGAGTC TCGGTCTTGC GCCGCTGATC
GTGAAAGAGA TTTTTCACAT CATTAGCGCT CTGCGACAGA CGGGCGTTGC TACATTGCTA
ATTGAGCAGA ATGCGCGCGC CGCACTGCAA ATCTCAGACT ACGGCTACGT GCTGGAAACG
GGTGAACTGG CGCTGGAAGG GCCGGCGGCG GACTTGGCGC AGAATCCGCG CGTGATCGAA
ACCTATCTGG GACTGGCGAA GAAAGCGGCT TAG
 
Protein sequence
MNAASPILDV DGLSVRYGKV EALHGAAIKV RPGQIVSVIG PNGAGKSTLL NAIMGALPTT 
GHAKGAVLYQ GEDVSAVPVE KRVARGMCLV PEKRELFASM TVEDNLVLGA YRRKRAGERN
FLDQLEPVFT LFPRLRERRK QAAGTLSGGE RQMLAVGRAL MGKPDLLMLD EPSLGLAPLI
VKEIFHIISA LRQTGVATLL IEQNARAALQ ISDYGYVLET GELALEGPAA DLAQNPRVIE
TYLGLAKKAA