Gene Bphyt_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3900 
Symbol 
ID6281858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4367483 
End bp4368334 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content59% 
IMG OID642623487 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001897511 
Protein GI187925869 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTA GCGAAGGCAC GCGCGCTCTG GATCCGTCCG AGTACATCGC GCACCACTTG 
CAGAACTTTT CCACAGCGCA CCAGACGTCG ATTTTCGACA TTCACGTCTG GAATCTGGAC
ACCCTTTTCT GGTCGATCGT TTGCGGTCTG GCCACGATCC TGATTCTGCA TCTCGCTGCC
CGCAAGGCAA CGTCCGGCGT GCCGGGTCGT TTCCAATGCG CGATCGAAAT GCTGGTTGAA
ATGGTCGAGG ATCAATCGAA GTCGATGATC CACGGCACGC GTACCTTCAT CGCACCGCTG
GCCCTGACCG TGTTCGTCTG GGTCGCGCTC ATGAACTCGC TCGACTTCAT CCCCGTCGAT
CTGCCGGGTC GCGTGATCGG CTGGCTGGGT CTGTCGGAAG TCATTCCCCA TCACCGCATC
GTGCCGACCG CCGACCTGAA CGGTACGCTC GGCATCGCAC TCGGCGTGTT CGCGCTGATG
ATTTACTACA ACTTCAAGAT CAAGGGCGCC GGCGGCTTCG TGCACGAACT GCTGTCCGCT
CCGTTCGGCG CGCATCCGCT CCTGTGGATC CCGAACCTTG CACTGAACAT TATCGAGTTC
GTCGCAAAGA CGGTCTCGCT CGGCATTCGG CTGTTCGGCA ACATGTACGC GGGCGAACTG
TTGTTCCTGC TGATTGCCCT GCTCGGCAGC ATGTGGGGTT TCGGCGCGGA CGCGTCAGTG
CTCGGCTTCA TCGGCCACGT CATCGCTGGC ACGGTTTGGG CGATCTTCCA CATCCTGATC
GTTCTGCTGC AAGCATTCAT TTTCATGATG CTGACGCTGG TGTACATCGG ACAGGCACAC
GACAGCCACT AA
 
Protein sequence
MAASEGTRAL DPSEYIAHHL QNFSTAHQTS IFDIHVWNLD TLFWSIVCGL ATILILHLAA 
RKATSGVPGR FQCAIEMLVE MVEDQSKSMI HGTRTFIAPL ALTVFVWVAL MNSLDFIPVD
LPGRVIGWLG LSEVIPHHRI VPTADLNGTL GIALGVFALM IYYNFKIKGA GGFVHELLSA
PFGAHPLLWI PNLALNIIEF VAKTVSLGIR LFGNMYAGEL LFLLIALLGS MWGFGADASV
LGFIGHVIAG TVWAIFHILI VLLQAFIFMM LTLVYIGQAH DSH