| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3893 |
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| Symbol | atpC |
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| ID | 6281017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4361246 |
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| End bp | 4361671 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623480 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001897504 |
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| Protein GI | 187925862 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.159746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACAA TCAAGGTAGA CGTCGTCAGC GCGGAAGAGC AGATCTTCTC GGGCCAGGCG
AAGTTCGTCG CGCTGCCGGG CGAAGCAGGT GAACTCGGCA TTCTGCCGGG CCACACGCCG
CTCATCACGC GGATTCGTCC GGGTGCGGTG CGCATCGAAG CTGAAAACGG TGAAGAAGAG
TTTGTCTTCG TCGCCGGCGG CATCCTCGAA ATCCAGCCGG GCGCTGTGAC GGTTCTCGCC
GACACGGCTA TTCGCGGCAA GGATCTCGAC GAAGCCAAGG CTGAAGATGC ACGCAAGCGT
GCGGAAGAAG CGCTGCAGAA CACGGGTTCG AACCTCGAAT ACGCGACCGC GCAAGCGGAA
CTGGCGTACG CGACGGCTCA GCTCGCTGCG ATTCAGCGTC TGCGCAAGCT GCGCGGTCAG
AACTAG
|
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| Protein sequence | MATIKVDVVS AEEQIFSGQA KFVALPGEAG ELGILPGHTP LITRIRPGAV RIEAENGEEE
FVFVAGGILE IQPGAVTVLA DTAIRGKDLD EAKAEDARKR AEEALQNTGS NLEYATAQAE
LAYATAQLAA IQRLRKLRGQ N
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