| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3892 |
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| Symbol | |
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| ID | 6282410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4359280 |
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| End bp | 4361010 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623479 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_001897503 |
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| Protein GI | 187925861 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.239396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC ATGCGTCAGG CGAAGGTGCA CTCATCGAAC CCAAAGACGG GCTGTCCTAT
GTCCGCGGGT CGACCGACAT TCCGCTGAGC GAAGCGACGG TCGGCCGGTT TCTGCGCGAT
ACGGCGGCAA GCTTTCCGGA CCGTCCGGCC GTGGTGTTTC GTGAGCAACT CATTCGGTGG
ACATGGAAGG AATTCGCTGA AGAAGTCGAT ATTTTGGCAG CAGGGCTGCT CACGCTTGGT
ATCGCGAAAG GTGACCGCGT GGGCATCTGG TCGCCAAATC GCGTGGAATG GTTACTGACC
CAATTTGCTA CCGCGCGCAT CGGTGCTGTG CTGGTCAATA TCAATCCCGC ATACAGGCTC
GCGGAGCTCG AGTACGCGCT TAACAAGGTC GGGTGCAAGG CAATCATCGC CGCCGAGCGC
TTCAAGACGT CCATGTACCT GGAGATGCTG CAGGCGCTCG CGCCCGAACT GGCCACGCAG
GCGCCCGGTG AACTGCACGC GGCGAGGTTG CCGGAATTGC GCTATGTGAT TCGTATGTGC
GACACAGAAA CGCCCGGCAT GCTGACCTTT TCCGACGTGA TCGAGCGCGG GCGCGTGTGC
CTCGACGTGG CGAAGCTCGA CGCCATCGGT GCCACGCTCT CCTGCCACGA GCCGATCAAT
ATCCAGTTCA CCAGCGGCAC GACAGGCAAT CCAAAGGGCG CGACGCTGAC CCACAGTAAC
GTGGTGAATA ACGCACGTTA CATTGCGATG GCGATGCGGC TGAGCGAGCA GGACGGTTTA
TGCATCCCCG TCCCGCTGTA CCACTGTTTC GGCATGGTGC TGGCGGTGCT GGCATGCGTG
TCGGTTGGCG CCAAAATGGT GTTTCCGGGC GAGGGCTTCG ACCCAGCCGC AACGCTGGCC
GCTGTCGCGG AAGAGCAGTG CACCGCGTTG CATGGCGTGC CGACCATGTT TATCGCCGAA
CTCGATCATC CGAACTTCGC CACCTACGAC TTCTCGCGCT TGCGCACCGG CATCATGGCG
GGCTCGCCTT GCCCGATCGA AACCATGAAG AAGGTCGTTT CCAGAATGCA TCTGAGCGAA
ATCACTATCG CCTATGGCAT GACGGAAACC AGCCCGGTCT CTTTCCAGAG CTCGACGACC
GATCCGCTCG ACAAGCGCAC GACAACGGTC GGCCGCATCC AGCCGCATCT GGAAGTGAAA
ATCGTCGATC CTCTCGGCGC GATCGTGCCG GTGGGTGAAA CCGGCGAGCT ATGCACGCGC
GGTTATTCGG TGATGCAGGG CTACTGGGGC GACGAGGCGA AGACGCGCGA AAGTATTGTC
GACGGCTGGA TGCATACCGG CGATCTGGCG ACGCTCGATG CCGAAGGCTA CTGCAACATA
GTCGGCCGGC TGAAGGACAT GCTGATTCGC GGCGGCGAGA ACATCTATCC GCGCGAGATC
GAGGAGTTTC TGTTCCGGCA TCCGAAGATT CAGAGCGTGC AGGTGTTCGG CGTCCCTGAC
ACGAAGTACG GCGAGGAGGT GTGTGCGTGG GTCGTATTGC GTTCGGGCGA GCAGGTGACG
GCTGAAGAGA TCCAGCAGTT CTGCCACGGG CAGATTGCGC ACTACAAGGT GCCGAAGTAC
ATCCGCTTCG TCGATGAACT GCCGATGACC GTCACCGGCA AGGTGCAGAA GTTCATCATG
CGCGAGCAGA TGATCAGCGA ATTGAAGCTG CGGGAAGACA AGACGGCGTG A
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| Protein sequence | MATHASGEGA LIEPKDGLSY VRGSTDIPLS EATVGRFLRD TAASFPDRPA VVFREQLIRW
TWKEFAEEVD ILAAGLLTLG IAKGDRVGIW SPNRVEWLLT QFATARIGAV LVNINPAYRL
AELEYALNKV GCKAIIAAER FKTSMYLEML QALAPELATQ APGELHAARL PELRYVIRMC
DTETPGMLTF SDVIERGRVC LDVAKLDAIG ATLSCHEPIN IQFTSGTTGN PKGATLTHSN
VVNNARYIAM AMRLSEQDGL CIPVPLYHCF GMVLAVLACV SVGAKMVFPG EGFDPAATLA
AVAEEQCTAL HGVPTMFIAE LDHPNFATYD FSRLRTGIMA GSPCPIETMK KVVSRMHLSE
ITIAYGMTET SPVSFQSSTT DPLDKRTTTV GRIQPHLEVK IVDPLGAIVP VGETGELCTR
GYSVMQGYWG DEAKTRESIV DGWMHTGDLA TLDAEGYCNI VGRLKDMLIR GGENIYPREI
EEFLFRHPKI QSVQVFGVPD TKYGEEVCAW VVLRSGEQVT AEEIQQFCHG QIAHYKVPKY
IRFVDELPMT VTGKVQKFIM REQMISELKL REDKTA
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