| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3890 |
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| Symbol | hemE |
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| ID | 6282408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4356274 |
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| End bp | 4357374 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623477 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001897501 |
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| Protein GI | 187925859 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCATA AACTCCTGAA CGACACTTTC CTGCGCGCAC TGCTGCGCCA GCCGACCGAC
TACACGCCGA TCTGGCTGAT GCGGCAAGCT GGCCGCTACC TGCCGGAATA CAACGCCACG
CGCGGTCGCG CGGGCAGTTT TCTCGGTTTG GCGAAGAGCC CAGCGTACGC GACAGAAGTC
ACGTTGCAGC CGCTCGACCG TTATCCGCTC GACGCCGCGA TCCTGTTCTC CGACATCCTC
ACCGTGCCCG ACGCCATGGG TCTCGGCCTC GAATTCGTGA CCGGCGAGGG TCCTAAGTTT
GTTCGCCCGG TTCGCACGGA AGACGACGTC GCGCGCCTCG CGGTGCCGGA CATCGACGCC
ACGCTGCGCT ACGTGACCGA CGCCGTGCGC GAAATTCGCA CCGCGCTGAC CGACGCGCAA
GGCCGTCAAC GCGTACCGCT GATCGGCTTT TCGGGCAGTC CGTGGACGCT CGCGTGCTAC
ATGGTCGAAG GCGGCGGGTC GGCGGATTTC CGCACGGTGA AGTCGATGCT CTATGCGCGT
CCGGATCTGA TGCACCGCAT TCTCGACGTC AACGCGCGCT CGGTCGCCGC GTATTTGAAC
GCCCAGATCG AAGCCGGCGC GCAAGCCGTA ATGATTTTCG ACACGTGGGG CGGGGCGCTG
GCTGACGGCG TGTATCAACG TTTCTCGCTG CAGTACATCC AGCAGGTGGT GAGTCAGTTG
AAGCGCGACC ACGGCGGCGA AAAAGTCCCG GTCATTACCT TCACGAAGGG CGGCGGGCTG
TGGCTCGACG AAATCGCCGA AACCGGCGTG GATGCAGTCG GCCTCGACTG GACGGTGAAC
CTGAGCAAAG CGCGCGAGCG CGTGGGTGGG AAGGTGGCGC TACAGGGCAA TATCGATCCA
TCGGTGCTGT TCGCGCCGCC GGCTTCAATC CGCATGGAAG CGCGCGCGGT GCTCGACAGC
TTCGGGAATC ATCCCGGCCA CGTGTTCAAT CTCGGCCACG GCATTTCGCA GTTCACACCG
CCGGAGAACG TCGCCGAGCT CGTCGACGAG GTGCATCGTC ATAGCCGGGC GATTCGCAGC
GGCGCTCATG CACCGGCATG A
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| Protein sequence | MAHKLLNDTF LRALLRQPTD YTPIWLMRQA GRYLPEYNAT RGRAGSFLGL AKSPAYATEV
TLQPLDRYPL DAAILFSDIL TVPDAMGLGL EFVTGEGPKF VRPVRTEDDV ARLAVPDIDA
TLRYVTDAVR EIRTALTDAQ GRQRVPLIGF SGSPWTLACY MVEGGGSADF RTVKSMLYAR
PDLMHRILDV NARSVAAYLN AQIEAGAQAV MIFDTWGGAL ADGVYQRFSL QYIQQVVSQL
KRDHGGEKVP VITFTKGGGL WLDEIAETGV DAVGLDWTVN LSKARERVGG KVALQGNIDP
SVLFAPPASI RMEARAVLDS FGNHPGHVFN LGHGISQFTP PENVAELVDE VHRHSRAIRS
GAHAPA
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