| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3889 |
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| Symbol | |
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| ID | 6282407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4353562 |
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| End bp | 4355808 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642623476 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001897500 |
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| Protein GI | 187925858 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGG TGTTCGTCCG CGTCGCACTC GACCATCCGC TGGCGACCTT GTTCGACTAC
CGTTTCGACA CGCCTGTGCC TGTCGCGCCG GGCATGCTGG TGAGCGTGCC GTTCGGGAAA
CGCCATGTCG TCGGGCTCGT CTGCGAAGTG ACCGCTCACA GCGACGTGCC GGCAGATCGT
CTTCGTTCCG TAGAAGGCGT GTGCACCGCC TGCCCGCCGG TGTCGTCGGA ATGGCTGAAG
CTGGCCGCGT TTGCCGCCGA CTACTACCAG CGCGGCCTCG GAGAGGTTGC GTTGCCCGCG
TTGCCACAGG CGTTGCGCGA TGCGTCGCGC TGGTCGCGCC TGTTCGCGCC GGAAGAGCGC
TACAGTCTCA CGCCCGCAGG CCGCGTCGCG TTGCCCGATG CCCTGCCGGC GCGGGCAAGC
GCCTTGCGGA AATTGGCGCA GGCGTTGGCC GAAACAGAGT TCCTGCTTGC CGCCGACGCC
CGCGCGCTAC ACCCCAAAGC GATTGCAACA CTCGACGCCT GGCGGGCGGA GGGCTGGGTT
GCATTGGACG TTATCGAAGC CGCGGCGGCG CTGGCCACAG CCGCTTCGGC TGACGTGCCC
GCGCCCGCGC TGCCCACGCT CACGGACGAG CAGGCGGCAG CCGTCGAAGC CATCCGCGAT
GCCGACGGCT TTGCGCCGTT TCTGCTGCAC GGCGTGACGG GCAGCGGCAA AACGGAGGTC
TATTTGCGCG CGCTCGCGGA GATTTTGGCC GCGAAGCCCG ACGCCCAGGC GCTCGTCCTC
GTCCCCGAAA TCAATCTCAC GCCGCAGTTC GAAGCGGCCT TCCGTGCGCG CTTCGCCGCG
CTCGAGGGCA CGTCGATCGT CACGCTGCAC AGCGGCCTCG CGGAAGGCGA GCGCGCCCGC
AACTGGTTCG CTGCGCACAC CGGCCGCGCG CGCATCGTGC TCGGCACGCG GCTGGCGGTG
CTGGCGTCGC TGCCCCAGCT CGCGATCATC GTCGTCGACG AGGAGCACGA TCCGGCTTAC
AAGCAGCAGG AAGGTTTGCG TTACTCGGCG CGCGATCTGG CGATTTATCG CGCCAAGCAA
CTCGGCTTGC CGGTCGTGCT CGGTTCGGCC ACGCCGTCGC TGGAAAGCTG GTGGCAGGCG
GACCAGGGCC GCTACAAGCG GCTCACCTTG TCGCGCCGTG CCGTCGCCGA GGCCGTTTTG
CCCACCGTCA AACTGATCGA TCTGGAAGAG GAGAGGCGGC GCGGGCGGGC ATCGGTGGAA
GGTTTGTCGG GGCCGCTGAT CGCGGCGCTG AAGGCGCGGC TCGAACGCGG CGAGCAAAGC
CTGGTGTTCC TGAACCGCCG CGGTTACGCG CCGCAGCTTG CCTGCGATGC CTGCGGCTGG
GTCGCCGGTT GTCCACGGTG CAGCGCGTAT GTCGTGCTGC ATAAGCCCGA GCGCGCGCTG
CGCTGCCACC ACTGCGGCTG GGAAGCGCGT ATCCCGCGTT CGTGCCCGGA GTGCGGCAAC
GTGGATATCG CGCCGATGGG CCGCGGCACG CAGCGCGTTG AAGAAACGCT GGCGAGCGCG
GTGCCCGGCG CCCGCATCTT GCGGATCGAC GCCGACAGCA CGCGTCGTAA AGGCAGCGCG
CAAGCGCTGT TCTCCGACGT CCACGCGGGC GAAGTCGATA TCCTTGTCGG CACGCAGATG
ATCGCCAAAG GTCACGACTT TCAGCGCGTA TCGCTGGTCG GCGTGCTGAA CGCCGACACC
GCGTTGTTTT CCCACGACTT CCGCGCGAGT GAACGCCTTT TCGCGCAACT GATGCAGGTG
AGCGGCCGGG CAGGCCGTGC GGGTTTGCCG GGTGAAGTGC TCGTGCAGAC ACGCTATCCG
CGCCACGCGC TCTATCACGC GTTGGGGCGC CACGACTATG TCGGCTTCGC CAATTCCACG
CTGGCCGAAC GGCGTGACGC GCACTTGCCG CCATTCGTCT ATCAGGCTTT GCTGCGCGCC
GAAGGTCGCA CGCTCGAAGC CGCGCTCGCC TTCCTGCAAC AGGCGGCGGC CGAGTTGACC
GGCATTGCGG CCGCCGAACG CGTGACGGTC TACGACGCGG TGCCGCTCAC CATCGTCAAA
GTAATGCACG TGCACCGCGC GCAATTGCTG ATCGAGAGCG CGTCGCGGGC CGCCTTGCAG
GCGACCTTGC GTGCCTGGCA GCCGCTGCTG CGCGGCCTGA AAGGCGTGCT GCGCTGGAAT
CTGGAAGTCG ATCCGCTCGA CATCTAA
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| Protein sequence | MSEVFVRVAL DHPLATLFDY RFDTPVPVAP GMLVSVPFGK RHVVGLVCEV TAHSDVPADR
LRSVEGVCTA CPPVSSEWLK LAAFAADYYQ RGLGEVALPA LPQALRDASR WSRLFAPEER
YSLTPAGRVA LPDALPARAS ALRKLAQALA ETEFLLAADA RALHPKAIAT LDAWRAEGWV
ALDVIEAAAA LATAASADVP APALPTLTDE QAAAVEAIRD ADGFAPFLLH GVTGSGKTEV
YLRALAEILA AKPDAQALVL VPEINLTPQF EAAFRARFAA LEGTSIVTLH SGLAEGERAR
NWFAAHTGRA RIVLGTRLAV LASLPQLAII VVDEEHDPAY KQQEGLRYSA RDLAIYRAKQ
LGLPVVLGSA TPSLESWWQA DQGRYKRLTL SRRAVAEAVL PTVKLIDLEE ERRRGRASVE
GLSGPLIAAL KARLERGEQS LVFLNRRGYA PQLACDACGW VAGCPRCSAY VVLHKPERAL
RCHHCGWEAR IPRSCPECGN VDIAPMGRGT QRVEETLASA VPGARILRID ADSTRRKGSA
QALFSDVHAG EVDILVGTQM IAKGHDFQRV SLVGVLNADT ALFSHDFRAS ERLFAQLMQV
SGRAGRAGLP GEVLVQTRYP RHALYHALGR HDYVGFANST LAERRDAHLP PFVYQALLRA
EGRTLEAALA FLQQAAAELT GIAAAERVTV YDAVPLTIVK VMHVHRAQLL IESASRAALQ
ATLRAWQPLL RGLKGVLRWN LEVDPLDI
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