Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3884 |
Symbol | |
ID | 6282819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4344188 |
End bp | 4345576 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623471 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001897495 |
Protein GI | 187925853 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCA GCGTCTTCGA CCTCTTCAAA ATCGGCATCG GCCCGTCCAG TTCGCATACG GTCGGGCCGA TGCGCGCGGC GCTGATGTTC GCTCAAGGGC TCGAACGCGA TGGGCTTCTT GCTGCGACCG CATCGGTCAA AGTGGAGTTG TACGGCTCGC TCGGCGCGAC GGGCAAAGGG CACGGGACCG ATCGCGGCGT CATGCTCGGC CTGATGGGCG ATGCGCCCGA CACCGTGGAT CCGGACACGA TAGCGCAGCG GCTCGAGGGA GTGCGCGTGT CCCGCAAGCT GGCATTGCTC GGCACGCACG AGGTGCCGTT CGTGCAGAAG GATCACATTT CGTTTTATCG TCAGGCGCTG CCCGAGCATC CGAACGGTTT GAAGTTGCGT GCGCTCGACG CGCAGGGCGA GACGTTGCGC GAATCGACCT ATCTGTCGGT GGGCGGCGGC TTCGTGGTGA CGGCCGGTGC GCCGAATACG AAAGTGCTTA GCGCAGTCGA ACAGTTGCCG CACGCGTTTC GCAGCGGCAA CGAGTTGCTC GCGCTGTGTG AATCGACCGG CAAAAGCATC GCCCAGTTGA TGTGGGAAAA CGAGCGCGTC TGGCACACGG AAGAAGAGAC GCGTGCGGGC CTGCTGAAGA TCTGGGACGT GATGCAATCG TGCGTAGCGC GGGGTTGCGG CATCAACAAT CCGGATGCCG ACGGTAACCT GCCCGGCCCG TTCCAGGTGA AACGTCGCGC GCCGCAACTG TATCGCGCGC TATCGGGCAA CCCCGAGCTG GCGTTGCGCG ATCCGCTGTC GATGATCGAC TGGATCAACC TCTACGCGAT CGCCGTCAAC GAAGAAAACG CCGCCGGCGG ACGCGTGGTG ACGGCGCCGA CCAACGGCGC GGCCGGCATC ATCCCGGCCG TGCTGCATTA CTACATGCGC TTCATGCCGG GCTCGAATCA GCAAGGCGTG ATCGACTTCC TGATGACCGC GGCGGCGATC GGCATCTTGT ACAAGCTGAA CGCGTCGATT TCGGGCGCCG AAGTGGGCTG TCAGGGCGAA GTGGGCGTTG CCTGCTCGAT GGCGGCGGGC GCGCTCGCCG CCGTCATGGG CGGCACGCCG CGCCAGGTCG AGAACGCCGC GGAAATCGGC ATGGAGCACA ACCTCGGGCT GACGTGCGAT CCGGTCGGCG GCATGGTGCA GATTCCGTGT ATCGAACGCA ATGCGATGGC ATCGGTGAAG GCGGTCAATG CCGCGCGCAT GGCTTTGCGC GGCGACGGCA GTCACTACGT GTCGCTCGAT TCGGTGATCA AGACCATGCG CGAGACCGGC GCGGATATGA AGACCAAGTA CAAGGAAACG TCGCGCGGCG GGTTGGCGGT GAATATCGTC GAGTGTTGA
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Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAALMF AQGLERDGLL AATASVKVEL YGSLGATGKG HGTDRGVMLG LMGDAPDTVD PDTIAQRLEG VRVSRKLALL GTHEVPFVQK DHISFYRQAL PEHPNGLKLR ALDAQGETLR ESTYLSVGGG FVVTAGAPNT KVLSAVEQLP HAFRSGNELL ALCESTGKSI AQLMWENERV WHTEEETRAG LLKIWDVMQS CVARGCGINN PDADGNLPGP FQVKRRAPQL YRALSGNPEL ALRDPLSMID WINLYAIAVN EENAAGGRVV TAPTNGAAGI IPAVLHYYMR FMPGSNQQGV IDFLMTAAAI GILYKLNASI SGAEVGCQGE VGVACSMAAG ALAAVMGGTP RQVENAAEIG MEHNLGLTCD PVGGMVQIPC IERNAMASVK AVNAARMALR GDGSHYVSLD SVIKTMRETG ADMKTKYKET SRGGLAVNIV EC
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