| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3884 |
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| Symbol | |
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| ID | 6282819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4344188 |
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| End bp | 4345576 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623471 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001897495 |
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| Protein GI | 187925853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA GCGTCTTCGA CCTCTTCAAA ATCGGCATCG GCCCGTCCAG TTCGCATACG
GTCGGGCCGA TGCGCGCGGC GCTGATGTTC GCTCAAGGGC TCGAACGCGA TGGGCTTCTT
GCTGCGACCG CATCGGTCAA AGTGGAGTTG TACGGCTCGC TCGGCGCGAC GGGCAAAGGG
CACGGGACCG ATCGCGGCGT CATGCTCGGC CTGATGGGCG ATGCGCCCGA CACCGTGGAT
CCGGACACGA TAGCGCAGCG GCTCGAGGGA GTGCGCGTGT CCCGCAAGCT GGCATTGCTC
GGCACGCACG AGGTGCCGTT CGTGCAGAAG GATCACATTT CGTTTTATCG TCAGGCGCTG
CCCGAGCATC CGAACGGTTT GAAGTTGCGT GCGCTCGACG CGCAGGGCGA GACGTTGCGC
GAATCGACCT ATCTGTCGGT GGGCGGCGGC TTCGTGGTGA CGGCCGGTGC GCCGAATACG
AAAGTGCTTA GCGCAGTCGA ACAGTTGCCG CACGCGTTTC GCAGCGGCAA CGAGTTGCTC
GCGCTGTGTG AATCGACCGG CAAAAGCATC GCCCAGTTGA TGTGGGAAAA CGAGCGCGTC
TGGCACACGG AAGAAGAGAC GCGTGCGGGC CTGCTGAAGA TCTGGGACGT GATGCAATCG
TGCGTAGCGC GGGGTTGCGG CATCAACAAT CCGGATGCCG ACGGTAACCT GCCCGGCCCG
TTCCAGGTGA AACGTCGCGC GCCGCAACTG TATCGCGCGC TATCGGGCAA CCCCGAGCTG
GCGTTGCGCG ATCCGCTGTC GATGATCGAC TGGATCAACC TCTACGCGAT CGCCGTCAAC
GAAGAAAACG CCGCCGGCGG ACGCGTGGTG ACGGCGCCGA CCAACGGCGC GGCCGGCATC
ATCCCGGCCG TGCTGCATTA CTACATGCGC TTCATGCCGG GCTCGAATCA GCAAGGCGTG
ATCGACTTCC TGATGACCGC GGCGGCGATC GGCATCTTGT ACAAGCTGAA CGCGTCGATT
TCGGGCGCCG AAGTGGGCTG TCAGGGCGAA GTGGGCGTTG CCTGCTCGAT GGCGGCGGGC
GCGCTCGCCG CCGTCATGGG CGGCACGCCG CGCCAGGTCG AGAACGCCGC GGAAATCGGC
ATGGAGCACA ACCTCGGGCT GACGTGCGAT CCGGTCGGCG GCATGGTGCA GATTCCGTGT
ATCGAACGCA ATGCGATGGC ATCGGTGAAG GCGGTCAATG CCGCGCGCAT GGCTTTGCGC
GGCGACGGCA GTCACTACGT GTCGCTCGAT TCGGTGATCA AGACCATGCG CGAGACCGGC
GCGGATATGA AGACCAAGTA CAAGGAAACG TCGCGCGGCG GGTTGGCGGT GAATATCGTC
GAGTGTTGA
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| Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAALMF AQGLERDGLL AATASVKVEL YGSLGATGKG
HGTDRGVMLG LMGDAPDTVD PDTIAQRLEG VRVSRKLALL GTHEVPFVQK DHISFYRQAL
PEHPNGLKLR ALDAQGETLR ESTYLSVGGG FVVTAGAPNT KVLSAVEQLP HAFRSGNELL
ALCESTGKSI AQLMWENERV WHTEEETRAG LLKIWDVMQS CVARGCGINN PDADGNLPGP
FQVKRRAPQL YRALSGNPEL ALRDPLSMID WINLYAIAVN EENAAGGRVV TAPTNGAAGI
IPAVLHYYMR FMPGSNQQGV IDFLMTAAAI GILYKLNASI SGAEVGCQGE VGVACSMAAG
ALAAVMGGTP RQVENAAEIG MEHNLGLTCD PVGGMVQIPC IERNAMASVK AVNAARMALR
GDGSHYVSLD SVIKTMRETG ADMKTKYKET SRGGLAVNIV EC
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