| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3877 |
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| Symbol | |
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| ID | 6280877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4333777 |
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| End bp | 4335867 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623464 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001897488 |
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| Protein GI | 187925846 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG GCCTGAACCC CGCTCAAAAT GAAGCGGTCC GTTATCTTGA CGGTCCGTGT
CTCGTGCTCG CCGGCGCAGG TAGCGGCAAG ACGCGCGTGA TCACGCAGAA GATCGCGCAC
CTGATCGAAG CCAAGGGCTT CGAGCCGCGC CACATCGCCG CTGTCACGTT CACGAACAAG
GCCGCGCTGG AAATGCGCGA GCGCGTGGGC AAGCTGCTCG AAGGCAAGAC ACTGACCACG
CCCGGCAAGG AAGGCCGCAA AGTGCCCGTC AACCAGTTGA CGGTCTGCAC CTTCCACTCG
CTCGGCGTGC AGATTCTGCG GCAGGAAGCG GAACATGTCG GCCTGAAGCC ACAGTTCTCG
ATCATGGATT CCGACGACTG CTTCGGCATG ATCCAGGAGC AGGTCGGCTC GACGGACAAG
GGCTTCATCC GCAAGATCCA GTCGATCATC TCGTTGTGGA AGAACGGCAT GATCATGCCC
GAGCAGGCGA TCGCGATCGC CGCGAACGAG GATGAACATC AGGCCGCGAT CGTCTACCGC
AATTACGTGG CGACGCTGCA TGCGTATCAG GCAGTCGATT TCGACGACCT GATCCGTCTG
CCCGCCGAAC TCTTCGAGAA GAACGAACAG GTGCGGGACC GCTGGCAGAA CAAGCTGCGC
TATCTGCTGA TCGACGAGTA TCAGGACACC AACGCCTGCC AGTACGAACT GGTGAAACTG
CTGGCCGGCA AGCGCGCGGC GTTCACCGCG GTCGGCGACG ACGATCAGGC GATCTACGGC
TGGCGCGGCG CGACGCTCGA AAATCTCGGC CAGCTCAGCA AGGATTTTCC GAAGCTGCAT
CTGATCAAGC TGGAGCAGAA CTACCGCTCG ACCGTGCGCA TTCTGACCGC CGCGAACAAC
GTGATCGCGA ACAATCCGAA GCTGTTCGAA AAGAAGCTGT GGTCCGAGCA CGGCATGGGC
GACACGATCA CGGTCACGCC GTGCAACGAC GAAGAGCATG AGGCCGAGTC CGTGGTGTTC
CGCCTGTCGG CGCACAAGTT CGAGCGGCGC GCGAATTTCC GCGACTACGC GATCCTGTAT
CGCGGCAATT TTCAGGCGCG CATTTTCGAG CAGGTGTTGC GGCGCGAGCG GATTCCTTAT
GTGCTGTCCG GCGGCCAATC GTTCTTCGAC AAGGCCGAGA TCAAGGACAT CTGCGCGTAT
TTGCGTCTGA TCGCCAACGC GAACGACGAC CCCGCGTTCA TCCGCGCAAT TACTACGCCG
CGACGCGGCG TCGGCAATAC GACGCTCGAG GCGCTCGGTT CGTTCGCGGG TCAGGCCAAG
GTGTCGCTGT TCGAGGCGGT GTACATGGGC GGCATCGAGG CGCGTCTGTC GCCACGGCAG
ATCGAACCCA TGCGCGTGTT CTGCGACTTC ATGCAGCGCC TCACCGATCG CGCCGAGAAG
GATGCCGCCG GCACGTTGCT CGACGAATTG ATGGATGCGA TCCACTACGA GGCCTATCTC
TACGACGCAT TCGACGAACG TCAGGCGCAG TCGAAGTGGC AGAACGTGCT GGAGTTCATG
GAGTGGCTCA AGCGCAAGGG CACGAAGGCT GAGCCTGCGG GCGCGGCGAA CGACGAAGCC
ACCGGCTACG ACACCGCCGA CGGTTTCGGC GACACCGGCA AGAGCCTGCT CGGCCTGATT
CAGACCGTGG CGCTGATGTC GATGCTCGAA GGCCGCGAGG AAGATCCCGA CGCGGTGCGG
CTTTCGACGG TGCATGCGTC GAAGGGTCTG GAGTATCCGC ACGTGTTTCT GGTGGGCGTC
GAGGAAGGCA TCATGCCGCA TCGCGGCGGT CCCGACGACG AGCCGATCGA CGACGCGCGC
ATCGAAGAAG AACGCCGGCT GATGTACGTG GCGATCACGC GTGCGCAGCG CAGTCTGCAT
CTGAACTGGT GCAAGAAGCG CAAGCGCGCG CGAGAGACGG TGGTGTGCGA GCCGTCGCGC
TTCATCCCCG AAATGCTGCT CGACGACGCC CCGCCCCCGA CGCCCGAAGA AGCGCCGATG
TCGCCGAAAG ACCGGCTCGC GAGTTTGAAG GCGCTGTTGC AGAAGCCTTG A
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| Protein sequence | MSAGLNPAQN EAVRYLDGPC LVLAGAGSGK TRVITQKIAH LIEAKGFEPR HIAAVTFTNK
AALEMRERVG KLLEGKTLTT PGKEGRKVPV NQLTVCTFHS LGVQILRQEA EHVGLKPQFS
IMDSDDCFGM IQEQVGSTDK GFIRKIQSII SLWKNGMIMP EQAIAIAANE DEHQAAIVYR
NYVATLHAYQ AVDFDDLIRL PAELFEKNEQ VRDRWQNKLR YLLIDEYQDT NACQYELVKL
LAGKRAAFTA VGDDDQAIYG WRGATLENLG QLSKDFPKLH LIKLEQNYRS TVRILTAANN
VIANNPKLFE KKLWSEHGMG DTITVTPCND EEHEAESVVF RLSAHKFERR ANFRDYAILY
RGNFQARIFE QVLRRERIPY VLSGGQSFFD KAEIKDICAY LRLIANANDD PAFIRAITTP
RRGVGNTTLE ALGSFAGQAK VSLFEAVYMG GIEARLSPRQ IEPMRVFCDF MQRLTDRAEK
DAAGTLLDEL MDAIHYEAYL YDAFDERQAQ SKWQNVLEFM EWLKRKGTKA EPAGAANDEA
TGYDTADGFG DTGKSLLGLI QTVALMSMLE GREEDPDAVR LSTVHASKGL EYPHVFLVGV
EEGIMPHRGG PDDEPIDDAR IEEERRLMYV AITRAQRSLH LNWCKKRKRA RETVVCEPSR
FIPEMLLDDA PPPTPEEAPM SPKDRLASLK ALLQKP
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