Gene Bphyt_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3858 
Symbol 
ID6280876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4314111 
End bp4314899 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content60% 
IMG OID642623445 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_001897470 
Protein GI187925828 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAA TTCCCGAACT CACGTCTTCC CTCAAGCAAT TGCGACTGTC CGGCATCCTG 
GACACGCTCG AAGCGCGCAA CCGTGAAGCC ATCGACCGTA AGCTCGCCTA TACCGACTTC
CTGACGTTGC TCATCCAGGA CGAGATCGCA CGGCGCGATC ATCGAAAGCT CGACGCCCGC
ATGCGCCGCG CGAACTTCCG TGGCCAGAAG ACACTGGAAG GTTTCGACTT CGACCGCCTG
CCCAATCTCA ATCGTGCTGT CGTCCATGAT CTGGCGACCT GCCGCTTTAT CGATGAGAAG
GTCAGCGTGC TGATCGCCGG TCCATGCGGA ACGGGCAAGT CGCATCTGGC GCAGGCACTG
GGCCATGCCG CCGCCCGGCA AGGTCACGAT GTCCTGTTCA TGACCCAGAC CCGGCTTCTC
GGCGCGCTAC GCAACGCGCA GGCCGTGGGC TCCTACGAAC GGCGCTTCCA GGCGCTTGCC
AAGGTGCCGC TGCTCATCAT TGACGACTTT GGACTGAAAC CCATGCGCAC GCCCGAAGAT
GAAGACTTCC ACGATCTGAT CGCCGAACGG TACGAACGTA CATCGACCGT CCTGACCAGC
AATCTTGATT TTACGGAATG GGGGGACGCG TTCGCGACCA ACAAGATGCT CGGCGCCGCA
ACGCTTGATC GCCTGCGACA TGCCGCGTAC CGCGTCGTGC TCGATGGCGA GAGCTACCGC
GTTCCTCGTC CGATGCCCGA GAGCAACAAA TCAGCACTTG CGAAAGGAGG TAAAAACAAG
GATTCTTGA
 
Protein sequence
MNPIPELTSS LKQLRLSGIL DTLEARNREA IDRKLAYTDF LTLLIQDEIA RRDHRKLDAR 
MRRANFRGQK TLEGFDFDRL PNLNRAVVHD LATCRFIDEK VSVLIAGPCG TGKSHLAQAL
GHAAARQGHD VLFMTQTRLL GALRNAQAVG SYERRFQALA KVPLLIIDDF GLKPMRTPED
EDFHDLIAER YERTSTVLTS NLDFTEWGDA FATNKMLGAA TLDRLRHAAY RVVLDGESYR
VPRPMPESNK SALAKGGKNK DS