| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3852 |
|---|
| Symbol | |
|---|
| ID | 6283186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4302146 |
|---|
| End bp | 4303153 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642623439 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_001897464 |
|---|
| Protein GI | 187925822 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTT CTGACCAAGT GAAAGCACTA CTGCGCGCAT ATGCTGGTAA CAATCACGAG
CATTTCTACG CGGTTGCTAT GCAGATGGCC GCGGACGAGG CTCATCGTGG CCACACAAAG
TTGGCGGCAG AACTGCGTGA CCTCGTCGAT GCCGCGAAGG CGGGCAGAAA GCCCGGGCTG
TCCTCAGTCC AAAGCAAGGG CGTCCAACGC GCTACTCCGC TGGCTCAACC GAAGGGCGAG
CTTTCGGAGC TGCTGACAGT GCAATATCCG CAAGAGCATC TGCAGCAGAT GGTTCTGTCT
GAGGCGGTGC GCGGAAAGCT GGACCGTGTA CTTCGGGAGC AACGGCATCA TGAGCAGTTG
CACAGCCACG GACTCAGCCC TCGTCGAAAG CTGCTTTTTG TTGGGCCGCC CGGTACCGGC
AAGACAATGA CGGCCGCCGC ATTGGCCGGC GAGCTCCGTC TACCGCTGTT CACAGCGCGG
TTCGACAGCC TCATTACCAA ATTCATGGGC GAAAGCGCCT CCAAGCTCCG GCTGGTTTTT
GAGGCGCTAA AATCAACGCG CGGCGTCTAC TTTTTCGACG AATTCGATTC GCTGGGCCTT
CAGCGCGGTA GCCAGCATGA CGTCGCGGAG ATGCGCCGCA CGTTGAACAT GTTCTTGCAG
CTCATCGAAC AGGACTCGTC GGATAGCCTT CTGATTGCAG CGACGAACCA CGGCAAAGAC
CTCGACACGG CTCTTTTCCG GCGATTCGAC GACGTCGTCA AATACGAGGC CCCCGACGAG
CGCCAGATTG AAATGCTGCT GAGAAACAGC CTTGGTGTCT TCGGAACGCC GGACATCGAC
TACCCTCATC TCGCGCATGT CGGCAAGGGT GAATCGCACG CGGACATCGT CAAGGCGTGC
CTCGACGCAC TAAAAGACGC GATTATGGAA GGCGAGAAAG CGGTAAGTGA AGCGAGCGTC
ATCCGCCATC TGGAGGAGCG CGCTCAAGGC CGGAACATAC ATCCGTAA
|
|---|
| Protein sequence | MARSDQVKAL LRAYAGNNHE HFYAVAMQMA ADEAHRGHTK LAAELRDLVD AAKAGRKPGL
SSVQSKGVQR ATPLAQPKGE LSELLTVQYP QEHLQQMVLS EAVRGKLDRV LREQRHHEQL
HSHGLSPRRK LLFVGPPGTG KTMTAAALAG ELRLPLFTAR FDSLITKFMG ESASKLRLVF
EALKSTRGVY FFDEFDSLGL QRGSQHDVAE MRRTLNMFLQ LIEQDSSDSL LIAATNHGKD
LDTALFRRFD DVVKYEAPDE RQIEMLLRNS LGVFGTPDID YPHLAHVGKG ESHADIVKAC
LDALKDAIME GEKAVSEASV IRHLEERAQG RNIHP
|
|---|
| |