| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3843 |
|---|
| Symbol | |
|---|
| ID | 6282607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4293966 |
|---|
| End bp | 4294667 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642623430 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001897455 |
|---|
| Protein GI | 187925813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA CTGACAACAA GATCTATCAA CCTTCAAAAA TGATTCACAT CCGCCCCACT
CACCTGTTGT CGATCCCGGA TGATTTTGAA GAAGAAATCA AATTCTTTAT GCCGCCAGCG
CAAGGCGCCG GCTCGCTTAC GACGATTGAG TCGGTGATGC TCCTGAAACT TCTGCGGTGC
GTCGAGCCGA CGTTCATATT CGAATTTGGT ACATATAAGG GTTATACGAC GCGCCTGTTG
TTGGAGAATC TCCCGGAGAG CAATGTCGAA GGCGAGCGGA TTTATACCCT TGACCTGCCA
GAGATCGACA ATATCGATTT TCAAGGGGGC GACAAAAACC TTGCTCTGGA GGCGCTCAAC
TTCAAACGAA AATATCTGAA TTCCAGCAAA AAAAATCTGG TTAAACAGAT TTTTCAGGAT
TCGATGACGC TTGATGCGGC ACAATACACG AAGAAATTTC AATATATTTT TGTCGATGCA
AATCACGAAG TCAGCTACGT CAAAAAGGAC ACCGAAAACT CACTGAAAAT GCTGGCGGAC
TCGCCCAGCT GCATCATCTG GCACGACTAC GGAAATCGTG AATTTCCGCA GTTGACTCAA
TATCTTGACG ATCTCGCGTC CGACATGACG CTTTACCACG TCGAAGGCAC GATGCTCGTG
TTCCACTTGA AGGGCGTTGA AGTCCCGGTT CGGAAATCCT GA
|
|---|
| Protein sequence | MTNTDNKIYQ PSKMIHIRPT HLLSIPDDFE EEIKFFMPPA QGAGSLTTIE SVMLLKLLRC
VEPTFIFEFG TYKGYTTRLL LENLPESNVE GERIYTLDLP EIDNIDFQGG DKNLALEALN
FKRKYLNSSK KNLVKQIFQD SMTLDAAQYT KKFQYIFVDA NHEVSYVKKD TENSLKMLAD
SPSCIIWHDY GNREFPQLTQ YLDDLASDMT LYHVEGTMLV FHLKGVEVPV RKS
|
|---|
| |