| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3840 |
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| Symbol | |
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| ID | 6282604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4291525 |
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| End bp | 4292289 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642623427 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001897452 |
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| Protein GI | 187925810 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCT TTGCTGACAA CTGCCTCGCC GGCGGCCTCT ATCTCGTGAC CGGCGCGTCG
TCGGGCATCG GCCAGGCCAG CGCGAAACTG ATCGCCAGCC TGGGCGGCCG CGTGATTGCC
GCCGGGCGCG ACGAGGCTCG CCTTCAGGCG ACGCTCGCCG GGCTTCACGG CAGCGGCCAT
GCTATCGCCG TCGCATCGCT CGCCGACGCC GATCAAACCG CCGAATGGGT GAGTCACCTC
GCTGAAACGC ACGGCACGTT TACCGGCGTG TTTCACGCGG CCGGCGTCGA GTTGATTCGT
CCCGCGAAGC TGACGAAGCA GGAACAACTG GACCAGGTGT TCGGCAGCAG TTTGTATGCG
GCGTTCGGTA TTGCGCGCGC CGGCAGCAAG AAGAACGTGA TCGCGGATGG CGGTTCGCTC
GTGTTCATGT CGTCGGTGGC CGGTTCGACG GGTCAGGCGG GCATGACGGC TTACTCCGCC
GCCAAGGCGG GCATCGACGG ACTGGTCCGC TCGCTTGCCT GCGAAATGGC GCCGCGCAAG
ATTCGCGTCA ACTCGATCGC GGCGGGCGCG GTTCACACCG CCATGCATGA GCGGCTGACG
GGCGGCAGCC CCGATGAAGC GCTCGCGGCC TACGAAAAGA GCCACCTGCT CGGCTTCGGC
GAGGCCGGCG ACGTCGCGCA ATCCGCGCTG TTCCTGCTGA GCGGGGCGAG CCGCTGGATC
ACCGGCACCA CGCTCGTCGT CGACGGCGGA TACAAGGTTC GATGA
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| Protein sequence | MTLFADNCLA GGLYLVTGAS SGIGQASAKL IASLGGRVIA AGRDEARLQA TLAGLHGSGH
AIAVASLADA DQTAEWVSHL AETHGTFTGV FHAAGVELIR PAKLTKQEQL DQVFGSSLYA
AFGIARAGSK KNVIADGGSL VFMSSVAGST GQAGMTAYSA AKAGIDGLVR SLACEMAPRK
IRVNSIAAGA VHTAMHERLT GGSPDEALAA YEKSHLLGFG EAGDVAQSAL FLLSGASRWI
TGTTLVVDGG YKVR
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