Gene Bphyt_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3839 
Symbol 
ID6284649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4290464 
End bp4291528 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content64% 
IMG OID642623426 
ProductBeta-ketoacyl-acyl-carrier-protein synthase I 
Protein accessionYP_001897451 
Protein GI187925809 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGC CGGACTTCAG CGCAGGGCGC GAGTTACGCA CGCAAGGCGC TCGCATCGCA 
GGCGTGGTGT CGTGCGTGCC GTCGAGACAG GTGGATAACG ACTACTTCCT CGAGCGGTTC
GATGCATCCG CTGTCCGCGA CGTGGTCAAG ATGATCGGCG TCAACCGACG CCGCTGGGCC
GACGCGCAGA CGAGCACCGG CGATCTGTGC CGCAAGGCCG GCGAGAAGCT GCTCGCTGGA
CTCGGCTGGC AGGCGGACTC GATCGACGCG CTGATCTTGG TCTCGCAAAC GCCGGACTAC
CGCTTGCCCG GCACGGCGTT CGTGCTGCAG GCGGAAATGG GTTTGCCGAG CGCGTGTCTC
GCCTTCGACA TCAACCTCGG CTGCTCCGGC TATCCGCAAG CGCTGTGGCT CGGCATGAAC
CTGATTCAGA CCGGCGCGGC GAAGCGCGTG CTGCTCGCGG TGGGCGACAC GATCAGCAAG
ATGATCGACC CGACCGACCG CTCCACCACG CTGCTGTTCG GCGACGCGGG CACGATGACG
GCGCTCGAAG CGTCGGACAG CGAGGCGGCC GCGCACTTCA TCATCGGTGC CGACGGCAAG
GGCGTGCGCA ATCTGATCGT GCCGTCGGGC GGCTTCAAGT CGTATGACGC CGCAGGCGAC
GAACGCATGG CCGGCAAATC GCCGCAATGC CTCTTCATGG ACGGCGGCGA GATTTTCAAT
TTCACGCTGA ACGCGGTGCC GAAGCTGGTC TCGCGCACGC TCGATATCGC CGGCCGCGAC
AAGGACACGT ACGACGCGTT CCTGTTCCAT CAGGCCAACC TGTTCATGCT CAAGCATCTG
GCCAAGAAGG CCGGCCTGCC GGCTGAACGC GTGCCGACCA ATATCGGCGA CTACGGCAAT
ACGAGTTGTG CATCGATTCC GCTGCTGATG ACCACCGAAC TGAAACACCG CCTGAAGGAA
GAAACGCTGC AACTGGGCAT GTTCGGCTTC GGCGTCGGGT ATTCGTGGGC TTCGGCGGCG
CTCGCGGTCG GGCCGCTCAC CATCGTGGAC ACGATCGAGA CATGA
 
Protein sequence
MSSPDFSAGR ELRTQGARIA GVVSCVPSRQ VDNDYFLERF DASAVRDVVK MIGVNRRRWA 
DAQTSTGDLC RKAGEKLLAG LGWQADSIDA LILVSQTPDY RLPGTAFVLQ AEMGLPSACL
AFDINLGCSG YPQALWLGMN LIQTGAAKRV LLAVGDTISK MIDPTDRSTT LLFGDAGTMT
ALEASDSEAA AHFIIGADGK GVRNLIVPSG GFKSYDAAGD ERMAGKSPQC LFMDGGEIFN
FTLNAVPKLV SRTLDIAGRD KDTYDAFLFH QANLFMLKHL AKKAGLPAER VPTNIGDYGN
TSCASIPLLM TTELKHRLKE ETLQLGMFGF GVGYSWASAA LAVGPLTIVD TIET