| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3836 |
|---|
| Symbol | |
|---|
| ID | 6284646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4288014 |
|---|
| End bp | 4289171 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642623423 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_001897448 |
|---|
| Protein GI | 187925806 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.040066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCAG CTTTGCCGCT TCGCGCTATC GAGTCACCGA TCGAGTCGCC GATCGACGAG
CGTATTTACG TTACCCAGCC GCATCTCGCG CCGCTCGAAG AGTTCATCCC CTATCTCCAG
CAGATCTGGG ACAGCAAGGT GCTGACCAAC GGCGGCCCGT TTCATCAGCA GTTCGAAGCG
GCGCTGTGCA AGTATCTCGG CGTCAAGCAT CTTGCATTGT TCACGAACGG CACGCTTGCA
TTGCTCACCG CATTGCAAGC GCTGCGCGTG ACGGGCGAAG TGATCACCAC GCCCTATTCG
TTCGTCGCGA CCGCGCACTC GCTGGTGTGG AACGGCATCA AGCCGGTGTT CGTCGATGTC
GATCCGGACA CGCTCAATCT CGATCCCGCG AAGATCGAAG CGGCCATCAC GCCGCAGACC
ACCGCGATCA TGCCGGTGCA TTGCTACGGC AAGCCGTGCG ATGTCGACGC CATCCAGAAG
ATCGCCGACA ACTACAACCT GAAGGTGATC TACGACGCCG CGCATGCGTT CGGCGTTCAG
ACCGACACCG GCAGCGTGCT CGAACACGGT GATCTGGCGG TGCTGAGCTT TCACGCCACG
AAGGTGTTCA ACACTTTCGA AGGCGGCGCG ATCATCTGCC AGGACGCGAA GACCAAGCAG
CGCATCGACC ATCTGAAGAA CTTCGGTTTC GTGGATGAAA CGACGGTGGT GGCCTCCGGC
ATCAACGGCA AGATGAGCGA AATCAATGCC GCGTTCGGTC TGCTGCAACT GCAGCACATC
GACGAAGCAT TGGCCCGGCG CGCGCAGATC GATGCGATGT ATCGCGAACG GCTGCGCGAC
ATTCCCGGCA TCCGCTGCAT GCAGAAAGCC GGCGAGAAAG TGGCGAATCA CTCGTACTTC
CCGATCCTCG TCGGCCCCGA ATTCCCAATC AGCCGCGACG CGCTGTATCA GAAGTTCCGC
GATCACGACA TCTACGCGCG CCGCTACTTC TATCCGCTGA TTTCCGACTT CCCGATTTAT
CGCGGTCTGC CGTCGGCACA CCGTGAAAAT CTGCCGATTG CGCACGCCGC CGCGCAACAG
GTGCTGTGTC TGCCGATTTT CCCGGCGCTG ACCGACGGCA TGCTCGAGCG CATTGTCGGA
CTCATCGCGG ACTGCTGA
|
|---|
| Protein sequence | MNAALPLRAI ESPIESPIDE RIYVTQPHLA PLEEFIPYLQ QIWDSKVLTN GGPFHQQFEA
ALCKYLGVKH LALFTNGTLA LLTALQALRV TGEVITTPYS FVATAHSLVW NGIKPVFVDV
DPDTLNLDPA KIEAAITPQT TAIMPVHCYG KPCDVDAIQK IADNYNLKVI YDAAHAFGVQ
TDTGSVLEHG DLAVLSFHAT KVFNTFEGGA IICQDAKTKQ RIDHLKNFGF VDETTVVASG
INGKMSEINA AFGLLQLQHI DEALARRAQI DAMYRERLRD IPGIRCMQKA GEKVANHSYF
PILVGPEFPI SRDALYQKFR DHDIYARRYF YPLISDFPIY RGLPSAHREN LPIAHAAAQQ
VLCLPIFPAL TDGMLERIVG LIADC
|
|---|
| |