| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3835 |
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| Symbol | |
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| ID | 6284645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4285645 |
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| End bp | 4288017 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623422 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001897447 |
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| Protein GI | 187925805 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.304839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTCC TGTACGAGCA GCCGCCTGCT GAACCCCTGA CGCCCGAACA ACAACTCGAG
CAGGACATCG CGCTCGTGTT GCAAACGGCG CTCGACCATC ACCACAAGGG CGAATTCGAG
GACGCGCATG CGCTGTATCG GGCCATTCTC GACGCGAATC CGAAACACGC CGACGTGCTG
TACAACCTCG GCGTACTGCT CGGCCAGACC GCCCGTACGG CGGAAGCCCT GCCGCTTTTC
GAGCAGTGCC TGGGACTTCA TCCTCACAAC GGCCAGTACT GGGCCGCCTA CATCAGCGCG
CTGATCGACG CCGGCGAAAC CGCCGCGGCA TGGCTGGCGC TCGAGATGGG TCAGAAGCAG
GGCTTGAAGG GACCGGCGGT GGACGGCTTG ATCGTGCGCA TGGCCAATCC CGGCAAAGTC
ATCCATACCT TGCCGGTCGC GGCGCAGAAG CCGCAAGCTG AGCCGGCCGC TGCAACAGAG
ACGCCGCCGG CTGCGGAAAG CACGCGCACC ACCATCGCAT CGGGCCGCCG GGTCAGCCAG
CAGGAAACCA ACCGCTACAC GGCGCTTTAT AACAAAGGCA ATGTCGTCGA GGCGGTGAAA
CTCGCCCGCT CCCTGACGCA ACGCTTTCCC GCCGATGGCA ATTCGTGGCG CTGGCTCGGC
ATCGCGCTGC ACCGTCTGGG CCGCTATGAC GAAGCGCTTG CCCCGCTGCG CAAAGCCGCT
GAACTGTTTC CCGAGGAACT CGAAAGCCGC ACCGTGCTGG CCGATACGCT GCGCCTGAAA
GGCTTGCCGG CGGAAACCGA GCAGGAGTGC CGCAAGATCC TCGCGATCAA CCCGGACTAC
GCCGAAGCGC AGCGGATCTT CGGCATGTCG CTGGTTCATC AGGGCCGCGT GGCCGAGGGC
CTGGCCGCCG CACGGCGCGC GATCGAACTC GCGCCGAACA ATTCCACCGC CTACAGCACG
CTCGGCGTGT TGCTGCTCGA TCTCGGCTTC GTGAGCGAGG CGGAAAAAGA ATTCCGCGCC
GCGCTGGAGA AGGATCCGAA AGACCACATC GCGGCCAACA ACTTCCTCTT CACGCTGTCG
CACAACCCGG AGATCGATCA CGGCACGCTG TTCGCCGAGC ACACCAACTT CGCGCGTCAG
CATGAAGATC CGGTGCGCGC GCAGTGGCCG CGTCACGTGA ACAAACGCTC GCCGGATCGC
AAGCTGAAGA TCGGCCTCGT TTCGGGCGAC CTGTTCCGCC ACGCCGTCGC GTCGTATTTG
CTGCCGATCA TGGAGCATCT GGCCAAGGAC CCGAATCTGT CCTTGCATGT GTACAACAAC
CACATCGCCG AAGACGACTA CACGCAGTTG CTGCGCAATT GCGCCGATGA ATGGCACCAG
ATCACCGGCA TGCCGGACGC GCAACTCGCC AACAAGATCC GCGACGAACG CATCGACATT
CTGTTCGATC TGTCGGGCCA CACGGGCCGC AACCGGCTGC TGACGTTCGC GCGCAAGCCC
GCGCCGATTC AGGTGACCTG GATGGGTTAT CCGGGCACCA CCGGCCTGAG CGCGATGGAC
TATTACCTGG CGGACAAGTA CGGCGTGCCG TTCGGGCCGG CGGAAAACCA GTTCTCCGAA
AAGATCGTCC ATCTGCCGTC GAGCGCGACG TTCCTGCCGG AGCAGAGCGC GCCGCCGGTC
AATATTCTGC CGGCCATGCA TAACGGCTAT GTCACGTTCG GCAGTTTCAA CCGCCTGAAC
AAACTGCGCC GCGACGTGAT CGCCCTGTGG GCCGAGTTGC TGCGCGCTCA GCCGACCGCA
AAAATGTTGC TCGGCGCGAT CGCCACCGAC GAAGACGAAC AGTTGCTGAT CGACTGGTTC
GCCGGGGAAG GCATCGAGCG CGAGCGGTTG ATGTTCCGCC GCCGTTCGAG CATTCCGGTT
TATCTGCAAC AGCATTTCCA CGTCGATATC TGCCTGGACA CGTTCCCGTA CACGGGTTCG
ACCACGGTGC TGAACTCGTT GTGGATGGGC GTGCCCACGC TGACTATCGC CGGCGACACG
CTGGCGAGCC GCGCCGGTAC GACCTGGATG TCGCATGTCG GGCTCGATGA CTTCGTGGTC
GCGAACAAGG AAGAATTCGT TGCGCGCGGC GTGGCATTGG CCTCCGACCT TCCCGCGCTC
GCCGACATCC GCACCGGCTT GCGCGAACGC TGCGCGGCCT CGGCGGCGTT CCGTCCCGAG
GTGGTCGCGG CAGGCGTCTC ACGCGCACTG CGGATCATGT GGCAACGCTG GTGTGCGGGC
GAACCGGCCG CTGCCTTCGA AGTTTCGATC GAAGACGTAA CCGGCGCCGC CAGCGAAGCG
CCCGTGCTGT CCGAACAAGG GGAATCCAAG TGA
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| Protein sequence | MTLLYEQPPA EPLTPEQQLE QDIALVLQTA LDHHHKGEFE DAHALYRAIL DANPKHADVL
YNLGVLLGQT ARTAEALPLF EQCLGLHPHN GQYWAAYISA LIDAGETAAA WLALEMGQKQ
GLKGPAVDGL IVRMANPGKV IHTLPVAAQK PQAEPAAATE TPPAAESTRT TIASGRRVSQ
QETNRYTALY NKGNVVEAVK LARSLTQRFP ADGNSWRWLG IALHRLGRYD EALAPLRKAA
ELFPEELESR TVLADTLRLK GLPAETEQEC RKILAINPDY AEAQRIFGMS LVHQGRVAEG
LAAARRAIEL APNNSTAYST LGVLLLDLGF VSEAEKEFRA ALEKDPKDHI AANNFLFTLS
HNPEIDHGTL FAEHTNFARQ HEDPVRAQWP RHVNKRSPDR KLKIGLVSGD LFRHAVASYL
LPIMEHLAKD PNLSLHVYNN HIAEDDYTQL LRNCADEWHQ ITGMPDAQLA NKIRDERIDI
LFDLSGHTGR NRLLTFARKP APIQVTWMGY PGTTGLSAMD YYLADKYGVP FGPAENQFSE
KIVHLPSSAT FLPEQSAPPV NILPAMHNGY VTFGSFNRLN KLRRDVIALW AELLRAQPTA
KMLLGAIATD EDEQLLIDWF AGEGIERERL MFRRRSSIPV YLQQHFHVDI CLDTFPYTGS
TTVLNSLWMG VPTLTIAGDT LASRAGTTWM SHVGLDDFVV ANKEEFVARG VALASDLPAL
ADIRTGLRER CAASAAFRPE VVAAGVSRAL RIMWQRWCAG EPAAAFEVSI EDVTGAASEA
PVLSEQGESK
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