| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3828 |
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| Symbol | |
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| ID | 6280806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4278814 |
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| End bp | 4279410 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642623415 |
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| Product | DNA-3-methyladenine glycosylase I |
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| Protein accession | YP_001897440 |
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| Protein GI | 187925798 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.874293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACACAGC GATGCAACTG GGTATCGAGC GAAGCGCTCG CACAGTATCA CGACACCGAA
TGGGGCGTCC CCTCGCGCGA CGACCAGCAT CTGTTCGAGA TGCTCGTGCT GGAAGGCGCT
CAGGCCGGCT TGTCGTGGTC GACGATTCTC AACAAACGGG CCGGCTATCG CCACGCGTTT
GCGGACTTCG ACATCGCGAA GGTTGCGCGC TTTACGCCGA AACACGTCGA GACGCTGGTG
AAGGACGAAA GTATCGTGCG CCACCGCGGC AAGATTGAAG CGGCCATTAC CAACGCCCGA
GCCGTCCAGC AGATTCAGGC CGAGCACGGC TCGCTCGCCA ACTTCATATG GTCGTTCGTC
GATCAGACGC CGATCCAGAA CGATTGGACT TCTTATAAGC AGGCGCCCGC GTCGACCGAC
ATTTCGGATG CGCTGAGCAA GGGGCTGAAG CGCTACGGCT GCAAGTTCGT CGGCTCGACG
ATCTGTTACG CGTTCATGCA GGCAGTCGGC ATGGTGAACG ACCACGAGGC GAGTTGCATG
TGCCGCGCGC GATGCGCGGC GCTTGGCAAG AAAGGACGGA ATCGTAAAGC GGGCTGA
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| Protein sequence | MTQRCNWVSS EALAQYHDTE WGVPSRDDQH LFEMLVLEGA QAGLSWSTIL NKRAGYRHAF
ADFDIAKVAR FTPKHVETLV KDESIVRHRG KIEAAITNAR AVQQIQAEHG SLANFIWSFV
DQTPIQNDWT SYKQAPASTD ISDALSKGLK RYGCKFVGST ICYAFMQAVG MVNDHEASCM
CRARCAALGK KGRNRKAG
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