| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3823 |
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| Symbol | |
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| ID | 6282506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4274490 |
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| End bp | 4275230 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623410 |
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| Product | aquaporin Z |
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| Protein accession | YP_001897435 |
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| Protein GI | 187925793 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.110407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTGT CAAAGCGCCT CGTTGCCGAG TTGTTCGGCA CTTTCTGGCT CGTGCTCGGG
GGCTGCGGCA GCGCTGTCCT CGCTGCCAAC TTCGCCGGCC CGGTTCACGG TCTGGGCATT
GGCTTCGTGG GCGTGTCGCT CGCGTTCGGC CTGACCGTGC TGACCATGGC TTTTGCGATC
GGCCACATTT CCGGCTGCCA TCTGAATCCG GCCGTCAGCG TCGGCCTGAC CGTCGCAGGG
CGCTTTCCCG CGCGCGACCT GCTGCCGTAC ATCGTTGCCC AGTTGATCGG TGCCGTGCTG
GGTGCGCTGG TGCTGTCGCT CATCGCGTCG GGCAAACCCG GCTTCGATCT CGTCGCCAGC
GGCTTCGCAA GTAACGGCTA TGGCGAGCGC TCGCCGGGCC ACTACTCGCT CGCCGCGGCA
TTCATTTGCG AAGTGGTGAT GACGGGCTTC TTCCTCTTTG TCATTCTCGG CTCGACCGAT
AAACGCGCGC CCGCCGGCTT CGCGCCGATC GCCATCGGCC TGTGCCTCAC CCTGATTCAC
CTGATCTCGA TCCCGGTCAC CAATACGTCG GTCAACCCGG CGCGTTCCAC GGGCCCGGCG
CTCTTCGTCG GCGGTGCGGC GATGGATCAG TTGTGGCTGT TCTGGGTTGC GCCGATCCTC
GGCGCAGTGA TCGCCGGCGT GTTGTACCCG GTTATCGCCG AAAGCCGCAG CGGCAATGCT
CAGAAGCTGG CGCTCGATTA A
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| Protein sequence | MQLSKRLVAE LFGTFWLVLG GCGSAVLAAN FAGPVHGLGI GFVGVSLAFG LTVLTMAFAI
GHISGCHLNP AVSVGLTVAG RFPARDLLPY IVAQLIGAVL GALVLSLIAS GKPGFDLVAS
GFASNGYGER SPGHYSLAAA FICEVVMTGF FLFVILGSTD KRAPAGFAPI AIGLCLTLIH
LISIPVTNTS VNPARSTGPA LFVGGAAMDQ LWLFWVAPIL GAVIAGVLYP VIAESRSGNA
QKLALD
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