Gene Bphyt_3802 details

Gene Information

• Locus tag: Bphyt_3802
• Symbol: flhF
• ID: 6283207
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phytofirmans PsJN
• Kingdom: Bacteria
• Replicon accession: NC_010681
• Strand: -
• Start bp: 4251221
• End bp: 4253095
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642623389
• Product: flagellar biosynthesis regulator FlhF
• Protein accession: YP_001897414
• Protein GI: 187925772
• COG category: [N] Cell motility
• COG ID: [COG1419] Flagellar GTP-binding protein
• TIGRFAM ID: [TIGR03499] flagellar biosynthetic protein FlhF

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCGCGAAG CGTTGGGCGC GGACGCCGTC GTGCTGTCCA ATCGCACGAT GGACGACGGC 
AGCGTCGAGA TCGTCGCACT GGCCGACAGC GACCTGGTTG CCCTCTCGCC GAAAGTCCCG 
CGCGCAGGGG CTGCTGCACA GCAGGTTGGA TCGATGAATG CGATGGCTGG ACGCCCCGCG 
CTGGCCGCCC CGCGCGCCAT GCCGGCGGCA GCGCCGATGC AGGCGAATCC GTACGCGAGC 
GGCATGCCCG ATGTGTTCTC GTCGGTGTTC GGCGCAAGCC CGGAAGCCGG TGCGGAGCAT 
CTGGGCAACG GCGCTTCCTA CTCTGACCAC ACGGACGACG ACGCGAGCGA CGCATTGGCC 
GCCGCCCTGA AGCCGGCCGC GAACGCACCC AAGGCGATGC CGGCCGCGCC GCTCAACGCA 
GCCGCCGCAG TGCCGTCGAA ACCGGTCAAC CCCGAGCAAC CGAGTGCGCG CGCCGCGGCC 
TCGCGCCTCA CCGAAGACAT CCGCGCCGAT CTGCTCAAAG CGGCCGGCGT GCCGGCTGCG 
CCCGCCGCGC CGGGCGCCGA CGCGCAAACG CCGCGCACGA TGGCCGAATC GAATCCCTGG 
CTGATCGACC ACGCGCGCCG CATCGCCGCC GAACAGCAGC AGGAGGGCGC ATATAGCGCG 
CGTCCCGCCG CGATGACGCC GGCCGCCGCG ATGGCCAAGG GCCTTGGCGC CGCCGTCGAG 
CCGGGCAAGC CCGCCGCGCC GCAAGCCGTC GACACGCCCG ACTGGGCGCG CGAAGGCGCG 
CAAGCCGCCG CGCGCCGCGC CGCGCAGAAA AACGCACCGG CTCCGTCCTC GACCGACGAC 
ACTCGCACGC CTGCTTCGGT CGCCGAAGCG ATCAAGGCGC GCATGGAGCA AGTGGTCAAC 
GACACCGTGA TGAGCGAGCT GTCGTCGATG CGCGGCATGA TGGAAGAACA CTTCGCCGGC 
CTGCTGTGGG GCGAGCGCCA GCGCCGCAAC CCGGTGCGCG CCTCGCTCAC CAAGCATCTG 
TTCGCGGCCG GCTTCTCCGC GCAGCTCGTG CAGATGATGG TCGACAACCT GCCGGACGAC 
ATCGAGAGCA TGGACGGCGG CATGGACTGG GTCCGCTCGG TGCTCGATTC GAACCTGCCG 
GTGATGGAAG ACGAAGACGC GCTGATGGAG CGCGGCGGCG TGTTCGCGCT GATGGGCCCG 
ACCGGCGTCG GCAAGACCAC GACCACCGCC AAGCTCGCCG CGCGCTGCGT GATGCGCTTC 
GGCGCCAGCA AGGTTGCCTT GCTCACCACC GACAGCTACC GGATCGGCGG CCACGAACAA 
TTGCGCATCT TCGGCAAGAT TCTAGGCGTG TCGGTGCATG CGGTGAAAGA CGGCGCCGAC 
CTGCAACTCG CGCTCTCCGA GCTGCGCAAC AAGCACATCG TGCTGATCGA CACGATCGGC 
ATGAGCCAGC GCGACCGCCT CGTCTCCGAC CAGATCGCCA TGCTGTGCCA CGCCGGTCAG 
CCGGTGCAGC GCCTGTTGCT GCTCAACGCG ACCAGCCATG GCGACACGCT CAACGAAGTC 
GTGCAGGCCT ATCAGCGCGC GCCGGATCAA CAGCCGCTCG CCGGCTGCAT TCTGACCAAG 
CTCGACGAAG CCACCAATCT GGGCGGCGTG CTCGATACGG TGATCCGCTA CAAGCTGCCG 
GTGCACTACG TGTCGACCGG TCAGAAGGTG CCGGAAAACC TGTACGTCGC AACGAAGAAA 
TTCCTGATCA AGAGCACCTT CTGCATACCG CGCGATAACT CGCCATTCGT GCCGCACGAC 
GACGACATTC CGGCGTTGCT GTCCGCATTG TCCGCACGTT CCACGGCCGA ATTGCACGAG 
GTCCGCTTTG GATAA 

 

Protein sequence

MREALGADAV VLSNRTMDDG SVEIVALADS DLVALSPKVP RAGAAAQQVG SMNAMAGRPA 
LAAPRAMPAA APMQANPYAS GMPDVFSSVF GASPEAGAEH LGNGASYSDH TDDDASDALA 
AALKPAANAP KAMPAAPLNA AAAVPSKPVN PEQPSARAAA SRLTEDIRAD LLKAAGVPAA 
PAAPGADAQT PRTMAESNPW LIDHARRIAA EQQQEGAYSA RPAAMTPAAA MAKGLGAAVE 
PGKPAAPQAV DTPDWAREGA QAAARRAAQK NAPAPSSTDD TRTPASVAEA IKARMEQVVN 
DTVMSELSSM RGMMEEHFAG LLWGERQRRN PVRASLTKHL FAAGFSAQLV QMMVDNLPDD 
IESMDGGMDW VRSVLDSNLP VMEDEDALME RGGVFALMGP TGVGKTTTTA KLAARCVMRF 
GASKVALLTT DSYRIGGHEQ LRIFGKILGV SVHAVKDGAD LQLALSELRN KHIVLIDTIG 
MSQRDRLVSD QIAMLCHAGQ PVQRLLLLNA TSHGDTLNEV VQAYQRAPDQ QPLAGCILTK 
LDEATNLGGV LDTVIRYKLP VHYVSTGQKV PENLYVATKK FLIKSTFCIP RDNSPFVPHD 
DDIPALLSAL SARSTAELHE VRFG