| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3800 |
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| Symbol | fliA |
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| ID | 6280925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4249596 |
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| End bp | 4250330 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623387 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001897412 |
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| Protein GI | 187925770 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.353237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAACG CTCAGGGAAA GATTTCCCAA GCCGAAGTTC TGACGAAGTA CGCACCGCTG
GTGCGTCGTC TCGGCTTGCA GCTCGTCGCC AAGATGCCGG CGAGCGTCGA TCTCGACGAT
CTGATCCAGG CCGGCATGAT CGGACTGCTG GACGCGGCAG GCCGCTACAA GGAAGACCAG
GGCGCGCAGT TCGAGACTTA CGCGAGCCAG CGGATTCGCG GCGCGATGCT CGACGAGTTG
CGCAGCAACG ACTGGTTGCC GCGCAGCTTG CGGCGCACCT CGCGAGAAGT GGAAACGGCG
GTGCACAAGG TGGAGCAGAA TCTGGGCCGC TCGGCGAGCG AAACGGAGAT TGCCGAGCAT
CTGCAAATGC CGCTCGACGA GTATCAGTCG ATGCTGCAGG ATCTGCACGG CAGCCAGCTG
ATCTATTACG AAGACTTCGA CCGTTCGGCG GACGACGAGC CGTTCCTCGA CCGCTACTGC
GTCGATCACT CGGACCCGCT GTCGGCGCTG CTCGACGACA GCTTGCGCTC GGCGCTGGTG
GAGGCGATCG ACCGCCTGCC GGACCGCGAG AAGCTGCTGA TGTCGCTGTA CTACGAACGC
GGCATGAACC TGCGCGAAAT CGGCGCGGTG ATGGAAGTCA GCGAATCGCG AGTCTGCCAG
TTGCACAGCC AGGCCGTGGC CCGTTTGCGT ACGCGCTTGC GTGAGATGGC CTGGGCGAAC
GCCGAGGCGA CCTGA
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| Protein sequence | MYNAQGKISQ AEVLTKYAPL VRRLGLQLVA KMPASVDLDD LIQAGMIGLL DAAGRYKEDQ
GAQFETYASQ RIRGAMLDEL RSNDWLPRSL RRTSREVETA VHKVEQNLGR SASETEIAEH
LQMPLDEYQS MLQDLHGSQL IYYEDFDRSA DDEPFLDRYC VDHSDPLSAL LDDSLRSALV
EAIDRLPDRE KLLMSLYYER GMNLREIGAV MEVSESRVCQ LHSQAVARLR TRLREMAWAN
AEAT
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