Gene Bphyt_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3796 
Symbol 
ID6280921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4247743 
End bp4248096 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content63% 
IMG OID642623383 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_001897408 
Protein GI187925766 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.921375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGTCG ATTCCACAAC CAATTCGAAT CTGCCGACGT TGAAAGACGC CCTGTCCCGT 
TCGCAACAAA GCGACGCGAC GACCGCGAAC GGCAACGCGC AGAATGCGGG CACGGCCTCG
CAGACCACCA CCAGCGGTTC GGGCGGCGCC AGCGTCAGCC TGTCGGGTCT GTCGCAACAT
CTGCGCAGCC TCGCGGCGTC CGGCTCGGCC GACATCGATA CGGCGCACGT CGAGTCGATC
AAGCAAGCCA TCAAGGACGG CTCGCTGAAG ATCGATTCCG GCAAGATCGC CGACGGCGTG
CTGAACACCG CACGCGAACT GTTGCAAAGC AAAACCTCGT CGACCGGCAA CTGA
 
Protein sequence
MKVDSTTNSN LPTLKDALSR SQQSDATTAN GNAQNAGTAS QTTTSGSGGA SVSLSGLSQH 
LRSLAASGSA DIDTAHVESI KQAIKDGSLK IDSGKIADGV LNTARELLQS KTSSTGN