Gene Bphyt_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3778 
Symbol 
ID6281848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4230264 
End bp4230728 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID642623365 
Productflagellar motor switch protein FliN 
Protein accessionYP_001897390 
Protein GI187925748 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC TGAACGCAAA GACTGAGGCC GAACTGGCCG CTGGCGCGCC GGAATTTGCC 
GCCGACGCAG CCGCCGCCGA AGACGAAGCG GCGATGGCCG ACTGGGCCAG CGCGCTCGCC
GAGCAGAACG ACAATTCGGA AGTCAGCGCG ACGACGGCCG GCGTGTTCCA GCCGCTGTCG
AAGGTCGAGC CGACCACGAC GCGCAACGAC ATCGACATGA TTCTGGACAT TCCTGTTCAG
ATGACCGTCG AACTCGGCCG CACCAAGATC GCGATCCGCA ACCTGCTGCA ACTCGCGCAG
GGTTCGGTGG TGGAACTGGA CGGCATGGCC GGCGAACCGA TGGACGTGCT GGTCAACGGC
TGTCTGATCG CGCAGGGCGA AGTGGTGGTG GTGAACGACA AGTTCGGTAT CCGTCTGACC
GACATCATTA CGCCATCCGA ACGTATCCGG AAGTTGAATC GATGA
 
Protein sequence
MSDLNAKTEA ELAAGAPEFA ADAAAAEDEA AMADWASALA EQNDNSEVSA TTAGVFQPLS 
KVEPTTTRND IDMILDIPVQ MTVELGRTKI AIRNLLQLAQ GSVVELDGMA GEPMDVLVNG
CLIAQGEVVV VNDKFGIRLT DIITPSERIR KLNR