Gene Bphyt_3753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3753 
Symbol 
ID6282019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4200578 
End bp4201588 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content64% 
IMG OID642623340 
ProductAlkaline phosphatase 
Protein accessionYP_001897365 
Protein GI187925723 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.634321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCT TTGTTTTGCG CCGCATCGGC ATGGTGATTC CGACTTTCAT CGGCATCACG 
ATCCTCGCGT TTGCGCTGAT TCACCTGATA CCGGGCGACC CCATCGAAGT GATGATGGGC
GAGCGCGGCG TCGATCCCGC CATGCACGCC GCGGCAATGC ACCGGCTCGG GCTCGACGAA
TCCCTGCCCA TGCAGTACGT CCACTACATT GGGCGTGCGT TGCACGGCGA CCTCGGCACC
TCGATCATCA CCAACACCAG CGTGATGGGC GAATTCCTCG CACGCTTTCC CGCCACCGTC
GAACTGTCGA TCTGCGCGAT GCTGTTCGCA CTGATCGTCG GCTTGCCTGC GGGCGTGTTC
GCGGCCTTGC GGCGCGGCAC GGTGGTCGAC CACGGCGTGA TGGGCACGGC CCTGACCGGC
TACTCGATGC CGATCTTCTG GTGGGGCTTG ATCCTCATCA TGGTGTTCTC CGTGAAGCTC
GGCTGGACGC CGGTGTCCGG CCGCATCGCG GTCGAATACG ACATTCCGCA CGTGACCGGC
TTCATGCTGA TCGACGCAAT GATGTCCACC GACGAAGGCG CGTTCAAATC CGCGCTCAGT
CACCTGATCC TGCCGGCTAT CGTGCTCGGC ACGATTCCGC TGGCGGTGAT CGCGCGCATG
ACGCGTTCGT CGATGCTCGA AGTGCTGCGT GAGGACTACA TTCGCACCGC GCGCGCGAAG
GGCTTGTCGC CGGGGCGCGT GATCGTCGTG CATGCGTTGC GCAATGCGCT GATTCCGGTG
GTGACGGTGA TCGGTCTGCA GGTGGGCACG CTGCTCGCGG GCGCGGTGCT GACCGAGACG
CTGTTTTCGT GGCCGGGTAT CGGCAAGTGG CTGATCGACG CGATCGGCCG GCGCGACTAC
CCGGTGGTGC AGGGCGGTAT TCTGATGATC GCCACGCTGG TGATCGTCGT GAACCTCGTC
GTCGATTTGT TGTACGGCGT GCTGAACCCG CGCATCCGCC ATACGAGGTA A
 
Protein sequence
MFRFVLRRIG MVIPTFIGIT ILAFALIHLI PGDPIEVMMG ERGVDPAMHA AAMHRLGLDE 
SLPMQYVHYI GRALHGDLGT SIITNTSVMG EFLARFPATV ELSICAMLFA LIVGLPAGVF
AALRRGTVVD HGVMGTALTG YSMPIFWWGL ILIMVFSVKL GWTPVSGRIA VEYDIPHVTG
FMLIDAMMST DEGAFKSALS HLILPAIVLG TIPLAVIARM TRSSMLEVLR EDYIRTARAK
GLSPGRVIVV HALRNALIPV VTVIGLQVGT LLAGAVLTET LFSWPGIGKW LIDAIGRRDY
PVVQGGILMI ATLVIVVNLV VDLLYGVLNP RIRHTR