Gene Bphyt_3752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3752 
Symbol 
ID6282018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4199654 
End bp4200571 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID642623339 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001897364 
Protein GI187925722 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.636145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA TTCAAAACGC AGTCCCCCAG TCGGTCACTC CCCCGAGTGG CCGCGCTATC 
GCCGCCCGTG AATTCTGGGC GAATTTCTCA CGCAACCGTG GCGCGGTCAG CGCCGGCGTC
ATCGTGCTCG TGCTGATCTT CATCGCGATC TTCGCGCCGT TGATCGCGCC GCACAGTCCG
ATCGAACAGT ACCGCGACTT CGTGAAGATT CCGCCCGCCT GGCTCGAGGG CGGCAACTGG
AAGTTCATTC TCGGCACCGA CGAAGCGGGC CGCGACATCC TCTCGCGTCT GATGTACGGC
GCGCGGCTGT CGTTCTGGAT CGGCTTCGTC TCGGTGGTGC TCGCGCTGAT TCCGGGCGTC
GTGCTCGGTC TGATCGCGGC TTTCTTCGAG AAGTGGGCGG ACACGCCGAT CATGCGCATC
ATGGACGTGC TGCTCGCGCT GCCGTCGCTG CTGCTCGCCG TCGCTGTCGT GGCGATCATC
GGTCCGGGCC TCGTCAATAC AATGCTCGCG ATCGCGATCG TCGCGCTGCC GGGCTATGTG
CGTTTGACGC GTGCATCGGC GCAGGGCGAG TTGCAGAAGG AGTACGTGAC GGCTTCGCGC
GTGGCGGGGG CCGGCACCAT GCGCCTGATG TTCTCGCAAG TGCTGCCGAA CTGCACCGCG
CCGTTGATCG TGCAGGCCAC CTTGGGCTTT TCGTCGGCGA TTCTCGATGC CGCCGCACTC
GGCTTTCTCG GCCTCGGCGT GCAACCGCCG TCGGCGGAGT GGGGCGCGAT GCTGGCCTCG
GCGCGCGATT ACATCGACAG CGCCTGGTGG ATCGTCACCA TGCCGGGCTT GTCCATCCTG
ATCTCGGTGC TTGCCATCAA TCTGCTCGGC GACGGGCTGC GCGACGCACT CGATCCCAAA
CTGAAAAGGA TGGCCTAA
 
Protein sequence
MADIQNAVPQ SVTPPSGRAI AAREFWANFS RNRGAVSAGV IVLVLIFIAI FAPLIAPHSP 
IEQYRDFVKI PPAWLEGGNW KFILGTDEAG RDILSRLMYG ARLSFWIGFV SVVLALIPGV
VLGLIAAFFE KWADTPIMRI MDVLLALPSL LLAVAVVAII GPGLVNTMLA IAIVALPGYV
RLTRASAQGE LQKEYVTASR VAGAGTMRLM FSQVLPNCTA PLIVQATLGF SSAILDAAAL
GFLGLGVQPP SAEWGAMLAS ARDYIDSAWW IVTMPGLSIL ISVLAINLLG DGLRDALDPK
LKRMA