Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3752 |
Symbol | |
ID | 6282018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4199654 |
End bp | 4200571 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623339 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001897364 |
Protein GI | 187925722 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.636145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACA TTCAAAACGC AGTCCCCCAG TCGGTCACTC CCCCGAGTGG CCGCGCTATC GCCGCCCGTG AATTCTGGGC GAATTTCTCA CGCAACCGTG GCGCGGTCAG CGCCGGCGTC ATCGTGCTCG TGCTGATCTT CATCGCGATC TTCGCGCCGT TGATCGCGCC GCACAGTCCG ATCGAACAGT ACCGCGACTT CGTGAAGATT CCGCCCGCCT GGCTCGAGGG CGGCAACTGG AAGTTCATTC TCGGCACCGA CGAAGCGGGC CGCGACATCC TCTCGCGTCT GATGTACGGC GCGCGGCTGT CGTTCTGGAT CGGCTTCGTC TCGGTGGTGC TCGCGCTGAT TCCGGGCGTC GTGCTCGGTC TGATCGCGGC TTTCTTCGAG AAGTGGGCGG ACACGCCGAT CATGCGCATC ATGGACGTGC TGCTCGCGCT GCCGTCGCTG CTGCTCGCCG TCGCTGTCGT GGCGATCATC GGTCCGGGCC TCGTCAATAC AATGCTCGCG ATCGCGATCG TCGCGCTGCC GGGCTATGTG CGTTTGACGC GTGCATCGGC GCAGGGCGAG TTGCAGAAGG AGTACGTGAC GGCTTCGCGC GTGGCGGGGG CCGGCACCAT GCGCCTGATG TTCTCGCAAG TGCTGCCGAA CTGCACCGCG CCGTTGATCG TGCAGGCCAC CTTGGGCTTT TCGTCGGCGA TTCTCGATGC CGCCGCACTC GGCTTTCTCG GCCTCGGCGT GCAACCGCCG TCGGCGGAGT GGGGCGCGAT GCTGGCCTCG GCGCGCGATT ACATCGACAG CGCCTGGTGG ATCGTCACCA TGCCGGGCTT GTCCATCCTG ATCTCGGTGC TTGCCATCAA TCTGCTCGGC GACGGGCTGC GCGACGCACT CGATCCCAAA CTGAAAAGGA TGGCCTAA
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Protein sequence | MADIQNAVPQ SVTPPSGRAI AAREFWANFS RNRGAVSAGV IVLVLIFIAI FAPLIAPHSP IEQYRDFVKI PPAWLEGGNW KFILGTDEAG RDILSRLMYG ARLSFWIGFV SVVLALIPGV VLGLIAAFFE KWADTPIMRI MDVLLALPSL LLAVAVVAII GPGLVNTMLA IAIVALPGYV RLTRASAQGE LQKEYVTASR VAGAGTMRLM FSQVLPNCTA PLIVQATLGF SSAILDAAAL GFLGLGVQPP SAEWGAMLAS ARDYIDSAWW IVTMPGLSIL ISVLAINLLG DGLRDALDPK LKRMA
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