| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3746 |
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| Symbol | |
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| ID | 6282774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4193821 |
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| End bp | 4195629 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623333 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001897358 |
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| Protein GI | 187925716 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.824926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACC GATCCCAGCC TGATCGCGTG CGCACCGAAC CGTCGCACGC CGCTTACCTT
GCCTCATTGA TCGACGCCGC GCTCGAAGCG CATCAAGCGG GCCGGCTCGA CGCCGCCGAA
TCCCTCTATC GCGAAACCCT CGTGCTCGAT CCTGCTCATA CGGGAGCGCT GCACTACTTC
GGCGTGCTGC AATTCCAGCG CGGCGATCAC GACACGGCCG CGAGCCTGAT GAGCCGCGCA
CTCAAACTCG ACCGTCACGA TGCCGCCTGC TGGAGCAACC GCGGACTCGT GGCCGCCGCA
CTCGGCCACC TGGACGAAGC GATGATCTGC TATGACCAGG CGCTGCAACT CCAGCCTGAT
TTCGCCGATG CGCACAACAA CTTCGGCGTC GCACTGCAAG CGCAAGGCGA TCTCAGTGAA
GCGATCGAGC AGTATCGATT GGCGCTGGCC TCGAACCCCA TGCTGCTCGA CGCACGTCTG
AACCTCGGCA CGGCGCTCAG CAAACTTGGG CACTTCGACG ACGCGTTGGC GTGCTATCGG
GAGGCCTTGT CGCTCGATCC GACATCGGCG GAAGCGCACT TCAATGTGGG CAATGCGCAC
AAAGCGCGAG GCGATCACGG CGCGGCAATC GCCAGCTTCG AGCGAGCGCT TTCGCTGCGC
GCGAATTACA CCGAGGCGCA CATCAATCTG GGTAGCCTGA TCGGCAAGCT CGGCGACTAC
GCGGGCGCTG AAGCGCATTA CCGGCGCGCG GTCGCGCTCA AACCGAATCC GACTCACCTC
GTGTGTCTGG GCGGATCGCT CGGCGCGCAA GGTCGGCTGG ACGAAGAGGA AGGCTTTTAT
CGCCAGGCGC TCGCACTCGA TCCGCACTAC GCGGACGCGC ATCAGAATCT CGCGTGGCTG
TTGCTCAAAC GCGGCGACTA TCGACAGGGC TGGGCCGAAT TCGCGCTGCG CTGGCGCAAG
AGCGACTATG ACGCGATCGC GGTGCCGGGC GTTGCTGAAT GGCGTGGCGA GTCGTTAGAG
GGGCGCCGTC TGTTGCTGGT CGGCGAGCAG GGTTTCGGTG ACCATTTCCA GTTCCTGCGC
TTTGCGGGCG TACTCGCCCA GCGCGGTGCA ACGGTCGAGC TGTGCGTGCG CGAGCCGCTG
CTGCCTTTGG TCGAACGCAT CGCGGGCGTG CATCGCGCAT TCAGCGGCAA ACCCGACGGC
CAATACGATT TCTGGGTGCC GATGATGAGC GTGCCCTCGT GTATCGGTTT GGATCGTCTT
GCCGACATTC CCGCAGAAGT GCCCTACCTG TTCGCCGACA AAACGAAGAT CAAGGCATGG
CGCAAACGTC TCGGCGCGAC CGACAAGTCG AAGCGCAAGG TGGGACTGGT CTGGGCCGGC
AGTCCTGGAT TCGGCAACGA CCGCTACCGC TCGATGCAAC TAGCCGAACT AGACGCGCTC
AGCGACATTG AAGACATTGC CTGGTACGCG CTGCAGAAAG GCCCCGCGCA TGCGCAACTG
GCCGAGGCGC CGCCCGCTTT CCGTGCCCAC GATTTCACAG CCGAGCTGAA CAGCTTCGAA
GACACGGCCG CGTTGATCAT GAACCTGGAT CTGGTGATCG CCGTGGACAC CGGCGTCGCG
CATCTGGCCG GAGCGTTGGG CAAACCGGTG TGGTTGATGT TGCCCGCCAA TTCGGACTGG
CGCTGGCTCG AAGCACGCAG CGACTCACCG TGGTATCCAG GAATGAGATT GTTCCGGCAG
CCGATGCTAG GAGATTGGGC GCCGGTGGTC GAGGACGTGA CCGGCGCACT GCGCGAAGGC
GGGATCTAA
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| Protein sequence | MEHRSQPDRV RTEPSHAAYL ASLIDAALEA HQAGRLDAAE SLYRETLVLD PAHTGALHYF
GVLQFQRGDH DTAASLMSRA LKLDRHDAAC WSNRGLVAAA LGHLDEAMIC YDQALQLQPD
FADAHNNFGV ALQAQGDLSE AIEQYRLALA SNPMLLDARL NLGTALSKLG HFDDALACYR
EALSLDPTSA EAHFNVGNAH KARGDHGAAI ASFERALSLR ANYTEAHINL GSLIGKLGDY
AGAEAHYRRA VALKPNPTHL VCLGGSLGAQ GRLDEEEGFY RQALALDPHY ADAHQNLAWL
LLKRGDYRQG WAEFALRWRK SDYDAIAVPG VAEWRGESLE GRRLLLVGEQ GFGDHFQFLR
FAGVLAQRGA TVELCVREPL LPLVERIAGV HRAFSGKPDG QYDFWVPMMS VPSCIGLDRL
ADIPAEVPYL FADKTKIKAW RKRLGATDKS KRKVGLVWAG SPGFGNDRYR SMQLAELDAL
SDIEDIAWYA LQKGPAHAQL AEAPPAFRAH DFTAELNSFE DTAALIMNLD LVIAVDTGVA
HLAGALGKPV WLMLPANSDW RWLEARSDSP WYPGMRLFRQ PMLGDWAPVV EDVTGALREG
GI
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