Gene Bphyt_3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3740 
Symbol 
ID6281509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4188364 
End bp4188876 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content59% 
IMG OID642623327 
Productputative transcriptional regulator 
Protein accessionYP_001897352 
Protein GI187925710 
COG category[K] Transcription 
COG ID[COG5631] Predicted transcription regulator, contains HTH domain (MarR family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.584444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCC ATCCCACCAA GATCGTCTCC TCGGAACATC TCGTGTCCGA GACCAGCGCG 
GAACTGTCCG AACTCGAGTA CGCGCTCATC ATGGCGGGCA ATGCATTCAA CCGATGGATG
GTGCGCTGCA TGTCGGCGGC GGGCGAAAAA GATATGACCG CCATCGAGGT TTCGCTGCTG
CACCACGTCA GCCATCGCGA GCGCCGCAAG AAGCTGGCGG ACATCTGCTT CGTGCTGAAC
ATCGAGGACA CGCACGTCGC CACCTACGCG TTGAAGAAGC TCGTAGCTAG AGGGTATGTA
AAAAGCGAAA AGACCGGCAA GGAAGTGTTC TTCTCGGCAA CCGATGCGGG CCGCGCGCTT
TGTCTGAAAT ATCGCGAGGT GCGCGAGAGC TGTCTGATTT CAACGCTGAA GGAAAGCGGC
CTGACCAACG AGCAGATCGG CGAAGCGGCG CAACTGATGC GCAACGCCTC AGGTCTTTAC
GACACGGCCG CGCGGGCGGC GGCGTCTTTA TAA
 
Protein sequence
MSRHPTKIVS SEHLVSETSA ELSELEYALI MAGNAFNRWM VRCMSAAGEK DMTAIEVSLL 
HHVSHRERRK KLADICFVLN IEDTHVATYA LKKLVARGYV KSEKTGKEVF FSATDAGRAL
CLKYREVRES CLISTLKESG LTNEQIGEAA QLMRNASGLY DTAARAAASL