Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3740 |
Symbol | |
ID | 6281509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4188364 |
End bp | 4188876 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642623327 |
Product | putative transcriptional regulator |
Protein accession | YP_001897352 |
Protein GI | 187925710 |
COG category | [K] Transcription |
COG ID | [COG5631] Predicted transcription regulator, contains HTH domain (MarR family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.584444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCC ATCCCACCAA GATCGTCTCC TCGGAACATC TCGTGTCCGA GACCAGCGCG GAACTGTCCG AACTCGAGTA CGCGCTCATC ATGGCGGGCA ATGCATTCAA CCGATGGATG GTGCGCTGCA TGTCGGCGGC GGGCGAAAAA GATATGACCG CCATCGAGGT TTCGCTGCTG CACCACGTCA GCCATCGCGA GCGCCGCAAG AAGCTGGCGG ACATCTGCTT CGTGCTGAAC ATCGAGGACA CGCACGTCGC CACCTACGCG TTGAAGAAGC TCGTAGCTAG AGGGTATGTA AAAAGCGAAA AGACCGGCAA GGAAGTGTTC TTCTCGGCAA CCGATGCGGG CCGCGCGCTT TGTCTGAAAT ATCGCGAGGT GCGCGAGAGC TGTCTGATTT CAACGCTGAA GGAAAGCGGC CTGACCAACG AGCAGATCGG CGAAGCGGCG CAACTGATGC GCAACGCCTC AGGTCTTTAC GACACGGCCG CGCGGGCGGC GGCGTCTTTA TAA
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Protein sequence | MSRHPTKIVS SEHLVSETSA ELSELEYALI MAGNAFNRWM VRCMSAAGEK DMTAIEVSLL HHVSHRERRK KLADICFVLN IEDTHVATYA LKKLVARGYV KSEKTGKEVF FSATDAGRAL CLKYREVRES CLISTLKESG LTNEQIGEAA QLMRNASGLY DTAARAAASL
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