Gene Bphyt_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3717 
Symbol 
ID6284609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4164232 
End bp4164585 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content56% 
IMG OID642623304 
ProductEndoribonuclease L-PSP 
Protein accessionYP_001897329 
Protein GI187925687 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.306574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAACG AGATTCAGCG ATTGCAAACA AACGCTCGCA TGAGCCAAGT TGTTGTGGCG 
CGCGGTACGG TGTATCTGTC GGGCCAGGTA CCCCACACGC CCAATGCCTC AATCGAAATT
CAGACGACAG AAGTGCTCGA CCGTATCGAC AAACTGCTCG AGACCGAGGG CATTGACAAG
ACTCGACTTC TGACTGCGAA CATCTGGTTG AGTAGCCCCG AGCATTTCGC TGAATTCAAT
GGTGTCTGGG ATGCCTGGGT TGCGGAAGGC ACTGCGCCGA CGCGCGCATG CGTCACATCG
CTGCTCATGC GCAAGGGGCT TGATGTGGAG ATTGCTGTCA CGGCGCTCGC TTAG
 
Protein sequence
MGNEIQRLQT NARMSQVVVA RGTVYLSGQV PHTPNASIEI QTTEVLDRID KLLETEGIDK 
TRLLTANIWL SSPEHFAEFN GVWDAWVAEG TAPTRACVTS LLMRKGLDVE IAVTALA